Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Msh6P54276 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Msh6P54276 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Msh6P54276 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Msh6P54276 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Msh6P54276 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Msh6P54276 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Msh6P54276 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Msh6P54276 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Msh6P54276 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Msh6P54276 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Msh6P54276 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Msh6P54276 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
Msh6P54276 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC29.14■■■□□ 2.26
Msh6P54276 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC29.14■■■□□ 2.26
Msh6P54276 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Msh6P54276 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Msh6P54276 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Msh6P54276 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Msh6P54276 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Msh6P54276 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Msh6P54276 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Msh6P54276 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Msh6P54276 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC29.12■■■□□ 2.25
Msh6P54276 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Msh6P54276 Gm44428-201ENSMUST00000204474 874 ntBASIC29.12■■■□□ 2.25
Msh6P54276 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Msh6P54276 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Msh6P54276 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Msh6P54276 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Msh6P54276 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
Msh6P54276 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Msh6P54276 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC29.11■■■□□ 2.25
Msh6P54276 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC29.11■■■□□ 2.25
Msh6P54276 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC29.1■■■□□ 2.25
Msh6P54276 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29.1■■■□□ 2.25
Msh6P54276 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Msh6P54276 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Msh6P54276 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Msh6P54276 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Msh6P54276 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Msh6P54276 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC29.07■■■□□ 2.24
Msh6P54276 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Msh6P54276 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Msh6P54276 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Msh6P54276 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC29.06■■■□□ 2.24
Msh6P54276 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC29.06■■■□□ 2.24
Msh6P54276 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Msh6P54276 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Msh6P54276 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Msh6P54276 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Msh6P54276 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Msh6P54276 Gm13238-201ENSMUST00000117655 780 ntBASIC29.04■■■□□ 2.24
Msh6P54276 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Msh6P54276 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Msh6P54276 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
Msh6P54276 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Msh6P54276 Gm43566-201ENSMUST00000196851 808 ntBASIC29.02■■■□□ 2.24
Msh6P54276 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC29.02■■■□□ 2.24
Msh6P54276 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
Msh6P54276 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC29.01■■■□□ 2.24
Msh6P54276 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Msh6P54276 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC29.01■■■□□ 2.24
Msh6P54276 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.24
Msh6P54276 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Msh6P54276 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
Msh6P54276 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC29■■■□□ 2.23
Msh6P54276 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Msh6P54276 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Msh6P54276 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
Msh6P54276 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
Msh6P54276 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Msh6P54276 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.98■■■□□ 2.23
Msh6P54276 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.98■■■□□ 2.23
Msh6P54276 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Msh6P54276 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.97■■■□□ 2.23
Msh6P54276 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
Msh6P54276 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Msh6P54276 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
Msh6P54276 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC28.96■■■□□ 2.23
Msh6P54276 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Msh6P54276 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.96■■■□□ 2.23
Msh6P54276 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC28.96■■■□□ 2.23
Msh6P54276 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Msh6P54276 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Msh6P54276 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC28.95■■■□□ 2.23
Msh6P54276 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.95■■■□□ 2.22
Msh6P54276 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.22
Msh6P54276 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
Msh6P54276 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Msh6P54276 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
Msh6P54276 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Msh6P54276 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Msh6P54276 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Msh6P54276 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Msh6P54276 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.92■■■□□ 2.22
Msh6P54276 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
Msh6P54276 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC28.92■■■□□ 2.22
Msh6P54276 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
Msh6P54276 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.91■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms