Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.59■□□□□ 0.73
GdnfP48540 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GdnfP48540 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GdnfP48540 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GdnfP48540 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.59■□□□□ 0.73
GdnfP48540 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GdnfP48540 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GdnfP48540 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GdnfP48540 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GdnfP48540 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
GdnfP48540 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GdnfP48540 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GdnfP48540 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GdnfP48540 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GdnfP48540 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GdnfP48540 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GdnfP48540 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GdnfP48540 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
GdnfP48540 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.54■□□□□ 0.72
GdnfP48540 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.54■□□□□ 0.72
GdnfP48540 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GdnfP48540 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GdnfP48540 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GdnfP48540 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GdnfP48540 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GdnfP48540 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GdnfP48540 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GdnfP48540 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GdnfP48540 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GdnfP48540 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GdnfP48540 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GdnfP48540 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
GdnfP48540 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.51■□□□□ 0.71
GdnfP48540 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GdnfP48540 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GdnfP48540 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GdnfP48540 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.5■□□□□ 0.71
GdnfP48540 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GdnfP48540 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.5■□□□□ 0.71
GdnfP48540 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.5■□□□□ 0.71
GdnfP48540 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
GdnfP48540 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
GdnfP48540 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GdnfP48540 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GdnfP48540 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GdnfP48540 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.49■□□□□ 0.71
GdnfP48540 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.49■□□□□ 0.71
GdnfP48540 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.49■□□□□ 0.71
GdnfP48540 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GdnfP48540 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GdnfP48540 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GdnfP48540 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GdnfP48540 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
GdnfP48540 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
GdnfP48540 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GdnfP48540 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GdnfP48540 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
GdnfP48540 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GdnfP48540 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
GdnfP48540 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GdnfP48540 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
GdnfP48540 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GdnfP48540 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GdnfP48540 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.46■□□□□ 0.71
GdnfP48540 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GdnfP48540 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GdnfP48540 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GdnfP48540 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GdnfP48540 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GdnfP48540 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GdnfP48540 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GdnfP48540 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GdnfP48540 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GdnfP48540 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GdnfP48540 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GdnfP48540 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GdnfP48540 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.44■□□□□ 0.7
GdnfP48540 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GdnfP48540 Particl-201ENSMUST00000205370 1560 ntBASIC19.44■□□□□ 0.7
GdnfP48540 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GdnfP48540 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
GdnfP48540 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GdnfP48540 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GdnfP48540 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GdnfP48540 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GdnfP48540 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
GdnfP48540 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GdnfP48540 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.42■□□□□ 0.7
GdnfP48540 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GdnfP48540 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GdnfP48540 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GdnfP48540 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GdnfP48540 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GdnfP48540 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GdnfP48540 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GdnfP48540 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GdnfP48540 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
GdnfP48540 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GdnfP48540 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GdnfP48540 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms