Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Thbs1P35441 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Thbs1P35441 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.77■□□□□ 0.92
Thbs1P35441 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Thbs1P35441 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.77■□□□□ 0.92
Thbs1P35441 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Thbs1P35441 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Thbs1P35441 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Thbs1P35441 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.77■□□□□ 0.91
Thbs1P35441 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.76■□□□□ 0.91
Thbs1P35441 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Thbs1P35441 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Thbs1P35441 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Thbs1P35441 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Thbs1P35441 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Thbs1P35441 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Thbs1P35441 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Thbs1P35441 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.74■□□□□ 0.91
Thbs1P35441 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Thbs1P35441 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thbs1P35441 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thbs1P35441 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thbs1P35441 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thbs1P35441 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Thbs1P35441 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Thbs1P35441 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Thbs1P35441 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.73■□□□□ 0.91
Thbs1P35441 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Thbs1P35441 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Thbs1P35441 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.72■□□□□ 0.91
Thbs1P35441 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Thbs1P35441 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Thbs1P35441 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Thbs1P35441 Gm45364-201ENSMUST00000210883 159 ntBASIC20.71■□□□□ 0.91
Thbs1P35441 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Thbs1P35441 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.7■□□□□ 0.9
Thbs1P35441 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Thbs1P35441 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thbs1P35441 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thbs1P35441 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thbs1P35441 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.69■□□□□ 0.9
Thbs1P35441 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thbs1P35441 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thbs1P35441 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thbs1P35441 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Thbs1P35441 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Thbs1P35441 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.67■□□□□ 0.9
Thbs1P35441 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Thbs1P35441 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thbs1P35441 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Thbs1P35441 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Thbs1P35441 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Thbs1P35441 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Thbs1P35441 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Thbs1P35441 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Thbs1P35441 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.65■□□□□ 0.9
Thbs1P35441 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Thbs1P35441 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thbs1P35441 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.65■□□□□ 0.9
Thbs1P35441 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.64■□□□□ 0.9
Thbs1P35441 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.64■□□□□ 0.9
Thbs1P35441 Terc-201ENSMUST00000082862 423 ntBASIC20.64■□□□□ 0.89
Thbs1P35441 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Thbs1P35441 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Thbs1P35441 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Thbs1P35441 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Thbs1P35441 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Thbs1P35441 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Thbs1P35441 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Thbs1P35441 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.63■□□□□ 0.89
Thbs1P35441 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.63■□□□□ 0.89
Thbs1P35441 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thbs1P35441 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Thbs1P35441 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thbs1P35441 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thbs1P35441 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thbs1P35441 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.62■□□□□ 0.89
Thbs1P35441 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thbs1P35441 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Thbs1P35441 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thbs1P35441 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thbs1P35441 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thbs1P35441 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thbs1P35441 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Thbs1P35441 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Thbs1P35441 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thbs1P35441 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thbs1P35441 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thbs1P35441 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thbs1P35441 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thbs1P35441 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thbs1P35441 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Thbs1P35441 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Thbs1P35441 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.59■□□□□ 0.89
Thbs1P35441 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.59■□□□□ 0.89
Thbs1P35441 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.59■□□□□ 0.89
Thbs1P35441 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thbs1P35441 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thbs1P35441 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Thbs1P35441 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms