Protein–RNA interactions for Protein: P33434

Mmp2, 72 kDa type IV collagenase, mousemouse

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp2P33434 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp2P33434 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp2P33434 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.93■□□□□ 0.94
Mmp2P33434 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp2P33434 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp2P33434 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp2P33434 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp2P33434 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp2P33434 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp2P33434 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp2P33434 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp2P33434 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp2P33434 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Mmp2P33434 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp2P33434 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp2P33434 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Mmp2P33434 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Mmp2P33434 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Mmp2P33434 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.89■□□□□ 0.93
Mmp2P33434 Gm11687-201ENSMUST00000118911 886 ntBASIC20.89■□□□□ 0.93
Mmp2P33434 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp2P33434 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Mmp2P33434 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mmp2P33434 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Mmp2P33434 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp2P33434 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Mmp2P33434 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.88■□□□□ 0.93
Mmp2P33434 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mmp2P33434 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Mmp2P33434 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.88■□□□□ 0.93
Mmp2P33434 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Mmp2P33434 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.87■□□□□ 0.93
Mmp2P33434 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Mmp2P33434 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mmp2P33434 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp2P33434 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.86■□□□□ 0.93
Mmp2P33434 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp2P33434 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp2P33434 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp2P33434 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mmp2P33434 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.85■□□□□ 0.93
Mmp2P33434 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mmp2P33434 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.85■□□□□ 0.93
Mmp2P33434 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp2P33434 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Mmp2P33434 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mmp2P33434 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp2P33434 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.83■□□□□ 0.93
Mmp2P33434 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mmp2P33434 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mmp2P33434 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp2P33434 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp2P33434 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp2P33434 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Mmp2P33434 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp2P33434 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Mmp2P33434 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mmp2P33434 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp2P33434 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp2P33434 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp2P33434 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp2P33434 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mmp2P33434 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.81■□□□□ 0.92
Mmp2P33434 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp2P33434 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp2P33434 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.8■□□□□ 0.92
Mmp2P33434 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp2P33434 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mmp2P33434 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp2P33434 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp2P33434 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp2P33434 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp2P33434 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mmp2P33434 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Mmp2P33434 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp2P33434 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Mmp2P33434 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp2P33434 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.78■□□□□ 0.92
Mmp2P33434 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp2P33434 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.78■□□□□ 0.92
Mmp2P33434 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp2P33434 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mmp2P33434 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mmp2P33434 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.76■□□□□ 0.91
Mmp2P33434 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp2P33434 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp2P33434 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp2P33434 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp2P33434 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Mmp2P33434 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp2P33434 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp2P33434 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.74■□□□□ 0.91
Mmp2P33434 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Mmp2P33434 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.74■□□□□ 0.91
Mmp2P33434 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp2P33434 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp2P33434 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp2P33434 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp2P33434 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp2P33434 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms