Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rom1P32958 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Rom1P32958 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.86■□□□□ 0.45
Rom1P32958 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.86■□□□□ 0.45
Rom1P32958 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.85■□□□□ 0.45
Rom1P32958 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.85■□□□□ 0.45
Rom1P32958 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rom1P32958 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.85■□□□□ 0.45
Rom1P32958 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rom1P32958 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rom1P32958 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rom1P32958 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.84■□□□□ 0.45
Rom1P32958 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rom1P32958 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rom1P32958 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rom1P32958 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rom1P32958 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rom1P32958 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rom1P32958 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rom1P32958 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rom1P32958 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rom1P32958 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rom1P32958 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rom1P32958 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rom1P32958 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rom1P32958 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rom1P32958 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rom1P32958 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rom1P32958 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rom1P32958 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rom1P32958 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rom1P32958 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Rom1P32958 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rom1P32958 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rom1P32958 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rom1P32958 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rom1P32958 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.78■□□□□ 0.44
Rom1P32958 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rom1P32958 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rom1P32958 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rom1P32958 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rom1P32958 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rom1P32958 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rom1P32958 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rom1P32958 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rom1P32958 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rom1P32958 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rom1P32958 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rom1P32958 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rom1P32958 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rom1P32958 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rom1P32958 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rom1P32958 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rom1P32958 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rom1P32958 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.75■□□□□ 0.43
Rom1P32958 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rom1P32958 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rom1P32958 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rom1P32958 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rom1P32958 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rom1P32958 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms