Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rom1P32958 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Rom1P32958 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.86■□□□□ 0.45
Rom1P32958 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.86■□□□□ 0.45
Rom1P32958 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rom1P32958 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.85■□□□□ 0.45
Rom1P32958 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.85■□□□□ 0.45
Rom1P32958 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rom1P32958 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.85■□□□□ 0.45
Rom1P32958 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rom1P32958 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rom1P32958 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rom1P32958 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.84■□□□□ 0.45
Rom1P32958 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rom1P32958 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rom1P32958 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rom1P32958 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rom1P32958 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rom1P32958 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rom1P32958 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rom1P32958 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rom1P32958 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rom1P32958 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rom1P32958 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rom1P32958 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rom1P32958 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rom1P32958 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rom1P32958 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rom1P32958 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rom1P32958 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rom1P32958 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rom1P32958 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rom1P32958 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rom1P32958 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Rom1P32958 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rom1P32958 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rom1P32958 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rom1P32958 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rom1P32958 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.78■□□□□ 0.44
Rom1P32958 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rom1P32958 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rom1P32958 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rom1P32958 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rom1P32958 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rom1P32958 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rom1P32958 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rom1P32958 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rom1P32958 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rom1P32958 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rom1P32958 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rom1P32958 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rom1P32958 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rom1P32958 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rom1P32958 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rom1P32958 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rom1P32958 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rom1P32958 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rom1P32958 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.75■□□□□ 0.43
Rom1P32958 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rom1P32958 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rom1P32958 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rom1P32958 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rom1P32958 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rom1P32958 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rom1P32958 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rom1P32958 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rom1P32958 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms