Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl6P27784 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccl6P27784 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Ccl6P27784 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccl6P27784 Mir3960-201ENSMUST00000198213 73 ntBASIC17.4■□□□□ 0.38
Ccl6P27784 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ccl6P27784 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl6P27784 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl6P27784 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccl6P27784 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl6P27784 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl6P27784 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl6P27784 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl6P27784 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl6P27784 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl6P27784 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccl6P27784 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccl6P27784 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl6P27784 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl6P27784 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl6P27784 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccl6P27784 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Ccl6P27784 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.38■□□□□ 0.37
Ccl6P27784 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl6P27784 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccl6P27784 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccl6P27784 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccl6P27784 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl6P27784 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccl6P27784 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl6P27784 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccl6P27784 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl6P27784 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl6P27784 Gm45364-201ENSMUST00000210883 159 ntBASIC17.36■□□□□ 0.37
Ccl6P27784 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl6P27784 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl6P27784 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl6P27784 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccl6P27784 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl6P27784 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl6P27784 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccl6P27784 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccl6P27784 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl6P27784 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl6P27784 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl6P27784 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.34■□□□□ 0.37
Ccl6P27784 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccl6P27784 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.33■□□□□ 0.36
Ccl6P27784 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ccl6P27784 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ccl6P27784 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccl6P27784 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ccl6P27784 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl6P27784 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl6P27784 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccl6P27784 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl6P27784 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl6P27784 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl6P27784 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.32■□□□□ 0.36
Ccl6P27784 Gm6311-201ENSMUST00000073790 878 ntBASIC17.32■□□□□ 0.36
Ccl6P27784 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccl6P27784 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccl6P27784 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl6P27784 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.31■□□□□ 0.36
Ccl6P27784 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccl6P27784 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl6P27784 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ccl6P27784 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl6P27784 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl6P27784 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl6P27784 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccl6P27784 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl6P27784 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ccl6P27784 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.3■□□□□ 0.36
Ccl6P27784 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl6P27784 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccl6P27784 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl6P27784 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl6P27784 Gm9812-201ENSMUST00000061934 968 ntBASIC17.29■□□□□ 0.36
Ccl6P27784 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl6P27784 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccl6P27784 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl6P27784 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccl6P27784 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl6P27784 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl6P27784 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccl6P27784 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccl6P27784 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl6P27784 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccl6P27784 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.28■□□□□ 0.36
Ccl6P27784 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl6P27784 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccl6P27784 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl6P27784 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl6P27784 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.27■□□□□ 0.36
Ccl6P27784 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccl6P27784 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccl6P27784 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.27■□□□□ 0.35
Ccl6P27784 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccl6P27784 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms