Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cd48P18181 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd48P18181 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cd48P18181 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd48P18181 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Cd48P18181 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd48P18181 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cd48P18181 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cd48P18181 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cd48P18181 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cd48P18181 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.04■□□□□ 0.8
Cd48P18181 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cd48P18181 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd48P18181 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd48P18181 Gm8503-201ENSMUST00000118131 455 ntBASIC20.03■□□□□ 0.8
Cd48P18181 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.03■□□□□ 0.8
Cd48P18181 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd48P18181 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd48P18181 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd48P18181 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cd48P18181 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cd48P18181 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cd48P18181 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd48P18181 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.02■□□□□ 0.8
Cd48P18181 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cd48P18181 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd48P18181 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cd48P18181 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.02■□□□□ 0.8
Cd48P18181 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd48P18181 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd48P18181 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd48P18181 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cd48P18181 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cd48P18181 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd48P18181 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd48P18181 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd48P18181 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd48P18181 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cd48P18181 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cd48P18181 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cd48P18181 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cd48P18181 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cd48P18181 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cd48P18181 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cd48P18181 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cd48P18181 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd48P18181 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd48P18181 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd48P18181 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cd48P18181 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cd48P18181 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd48P18181 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.98■□□□□ 0.79
Cd48P18181 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cd48P18181 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd48P18181 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cd48P18181 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cd48P18181 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cd48P18181 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.97■□□□□ 0.79
Cd48P18181 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cd48P18181 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.97■□□□□ 0.79
Cd48P18181 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cd48P18181 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cd48P18181 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cd48P18181 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cd48P18181 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd48P18181 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.96■□□□□ 0.79
Cd48P18181 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.96■□□□□ 0.79
Cd48P18181 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cd48P18181 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cd48P18181 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cd48P18181 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.95■□□□□ 0.78
Cd48P18181 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.95■□□□□ 0.78
Cd48P18181 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.95■□□□□ 0.78
Cd48P18181 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.95■□□□□ 0.78
Cd48P18181 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd48P18181 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd48P18181 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
Cd48P18181 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd48P18181 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cd48P18181 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cd48P18181 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.93■□□□□ 0.78
Cd48P18181 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cd48P18181 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cd48P18181 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.93■□□□□ 0.78
Cd48P18181 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cd48P18181 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd48P18181 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cd48P18181 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cd48P18181 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd48P18181 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd48P18181 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cd48P18181 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cd48P18181 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd48P18181 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cd48P18181 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd48P18181 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd48P18181 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cd48P18181 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cd48P18181 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd48P18181 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms