Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ApoeP08226 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ApoeP08226 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
ApoeP08226 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
ApoeP08226 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
ApoeP08226 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.33■■□□□ 1
ApoeP08226 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.32■■□□□ 1
ApoeP08226 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
ApoeP08226 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ApoeP08226 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.32■■□□□ 1
ApoeP08226 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ApoeP08226 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.31■■□□□ 1
ApoeP08226 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ApoeP08226 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.3■■□□□ 1
ApoeP08226 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.3■■□□□ 1
ApoeP08226 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ApoeP08226 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ApoeP08226 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.29■■□□□ 1
ApoeP08226 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ApoeP08226 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
ApoeP08226 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.28■■□□□ 1
ApoeP08226 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ApoeP08226 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ApoeP08226 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ApoeP08226 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.27■■□□□ 1
ApoeP08226 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
ApoeP08226 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ApoeP08226 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.27■■□□□ 1
ApoeP08226 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ApoeP08226 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ApoeP08226 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ApoeP08226 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ApoeP08226 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ApoeP08226 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ApoeP08226 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.25■□□□□ 0.99
ApoeP08226 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ApoeP08226 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ApoeP08226 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ApoeP08226 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ApoeP08226 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ApoeP08226 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.24■□□□□ 0.99
ApoeP08226 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ApoeP08226 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.23■□□□□ 0.99
ApoeP08226 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ApoeP08226 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ApoeP08226 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ApoeP08226 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ApoeP08226 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ApoeP08226 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ApoeP08226 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ApoeP08226 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ApoeP08226 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ApoeP08226 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ApoeP08226 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ApoeP08226 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ApoeP08226 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.19■□□□□ 0.98
ApoeP08226 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.18■□□□□ 0.98
ApoeP08226 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ApoeP08226 Gm45855-201ENSMUST00000212546 880 ntBASIC21.17■□□□□ 0.98
ApoeP08226 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ApoeP08226 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.16■□□□□ 0.98
ApoeP08226 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ApoeP08226 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
ApoeP08226 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ApoeP08226 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ApoeP08226 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ApoeP08226 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ApoeP08226 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ApoeP08226 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ApoeP08226 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ApoeP08226 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
ApoeP08226 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.15■□□□□ 0.98
ApoeP08226 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ApoeP08226 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ApoeP08226 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ApoeP08226 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.14■□□□□ 0.98
ApoeP08226 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ApoeP08226 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.14■□□□□ 0.97
ApoeP08226 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.14■□□□□ 0.97
ApoeP08226 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ApoeP08226 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ApoeP08226 Gm37136-201ENSMUST00000194368 194 ntBASIC21.13■□□□□ 0.97
ApoeP08226 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.13■□□□□ 0.97
ApoeP08226 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ApoeP08226 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ApoeP08226 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ApoeP08226 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.12■□□□□ 0.97
ApoeP08226 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ApoeP08226 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ApoeP08226 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.12■□□□□ 0.97
ApoeP08226 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ApoeP08226 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.11■□□□□ 0.97
ApoeP08226 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ApoeP08226 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
ApoeP08226 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ApoeP08226 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.11■□□□□ 0.97
ApoeP08226 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ApoeP08226 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ApoeP08226 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ApoeP08226 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms