Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tgfb1P04202 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfb1P04202 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tgfb1P04202 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfb1P04202 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfb1P04202 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Tgfb1P04202 Gm9812-201ENSMUST00000061934 968 ntBASIC20.84■□□□□ 0.93
Tgfb1P04202 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.84■□□□□ 0.93
Tgfb1P04202 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tgfb1P04202 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tgfb1P04202 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.83■□□□□ 0.93
Tgfb1P04202 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tgfb1P04202 Gm45364-201ENSMUST00000210883 159 ntBASIC20.83■□□□□ 0.93
Tgfb1P04202 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tgfb1P04202 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.83■□□□□ 0.92
Tgfb1P04202 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tgfb1P04202 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.82■□□□□ 0.92
Tgfb1P04202 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tgfb1P04202 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfb1P04202 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.81■□□□□ 0.92
Tgfb1P04202 Mir3960-201ENSMUST00000198213 73 ntBASIC20.81■□□□□ 0.92
Tgfb1P04202 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tgfb1P04202 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfb1P04202 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfb1P04202 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tgfb1P04202 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tgfb1P04202 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.79■□□□□ 0.92
Tgfb1P04202 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Tgfb1P04202 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfb1P04202 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfb1P04202 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfb1P04202 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.79■□□□□ 0.92
Tgfb1P04202 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfb1P04202 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfb1P04202 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tgfb1P04202 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfb1P04202 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfb1P04202 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.78■□□□□ 0.92
Tgfb1P04202 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tgfb1P04202 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tgfb1P04202 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Tgfb1P04202 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.77■□□□□ 0.91
Tgfb1P04202 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.77■□□□□ 0.91
Tgfb1P04202 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tgfb1P04202 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tgfb1P04202 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tgfb1P04202 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tgfb1P04202 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.75■□□□□ 0.91
Tgfb1P04202 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tgfb1P04202 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfb1P04202 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfb1P04202 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tgfb1P04202 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Tgfb1P04202 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tgfb1P04202 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tgfb1P04202 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tgfb1P04202 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tgfb1P04202 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.72■□□□□ 0.91
Tgfb1P04202 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tgfb1P04202 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.72■□□□□ 0.91
Tgfb1P04202 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tgfb1P04202 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.71■□□□□ 0.91
Tgfb1P04202 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tgfb1P04202 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.71■□□□□ 0.91
Tgfb1P04202 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tgfb1P04202 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.71■□□□□ 0.91
Tgfb1P04202 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tgfb1P04202 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tgfb1P04202 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.7■□□□□ 0.9
Tgfb1P04202 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tgfb1P04202 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.69■□□□□ 0.9
Tgfb1P04202 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfb1P04202 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfb1P04202 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tgfb1P04202 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tgfb1P04202 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tgfb1P04202 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.68■□□□□ 0.9
Tgfb1P04202 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tgfb1P04202 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.68■□□□□ 0.9
Tgfb1P04202 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tgfb1P04202 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tgfb1P04202 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.68■□□□□ 0.9
Tgfb1P04202 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tgfb1P04202 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfb1P04202 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Tgfb1P04202 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfb1P04202 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfb1P04202 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tgfb1P04202 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tgfb1P04202 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tgfb1P04202 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.66■□□□□ 0.9
Tgfb1P04202 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tgfb1P04202 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tgfb1P04202 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tgfb1P04202 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfb1P04202 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfb1P04202 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.65■□□□□ 0.9
Tgfb1P04202 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tgfb1P04202 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tgfb1P04202 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms