Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Igh-VJ558P01758 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.58■□□□□ 0.73
Igh-VJ558P01758 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Igh-VJ558P01758 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Igh-VJ558P01758 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.58■□□□□ 0.72
Igh-VJ558P01758 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Igh-VJ558P01758 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.58■□□□□ 0.72
Igh-VJ558P01758 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igh-VJ558P01758 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igh-VJ558P01758 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igh-VJ558P01758 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Igh-VJ558P01758 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igh-VJ558P01758 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igh-VJ558P01758 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.56■□□□□ 0.72
Igh-VJ558P01758 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igh-VJ558P01758 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igh-VJ558P01758 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Igh-VJ558P01758 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igh-VJ558P01758 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.55■□□□□ 0.72
Igh-VJ558P01758 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Igh-VJ558P01758 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igh-VJ558P01758 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.54■□□□□ 0.72
Igh-VJ558P01758 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Igh-VJ558P01758 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Igh-VJ558P01758 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igh-VJ558P01758 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igh-VJ558P01758 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igh-VJ558P01758 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.53■□□□□ 0.72
Igh-VJ558P01758 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igh-VJ558P01758 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.53■□□□□ 0.72
Igh-VJ558P01758 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.53■□□□□ 0.72
Igh-VJ558P01758 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igh-VJ558P01758 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igh-VJ558P01758 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Igh-VJ558P01758 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igh-VJ558P01758 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
Igh-VJ558P01758 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Igh-VJ558P01758 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Igh-VJ558P01758 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.51■□□□□ 0.71
Igh-VJ558P01758 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igh-VJ558P01758 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igh-VJ558P01758 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Igh-VJ558P01758 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igh-VJ558P01758 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igh-VJ558P01758 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.5■□□□□ 0.71
Igh-VJ558P01758 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igh-VJ558P01758 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.5■□□□□ 0.71
Igh-VJ558P01758 Terc-201ENSMUST00000082862 423 ntBASIC19.5■□□□□ 0.71
Igh-VJ558P01758 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Igh-VJ558P01758 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igh-VJ558P01758 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igh-VJ558P01758 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igh-VJ558P01758 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igh-VJ558P01758 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igh-VJ558P01758 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igh-VJ558P01758 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igh-VJ558P01758 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.49■□□□□ 0.71
Igh-VJ558P01758 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igh-VJ558P01758 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.48■□□□□ 0.71
Igh-VJ558P01758 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igh-VJ558P01758 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igh-VJ558P01758 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igh-VJ558P01758 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igh-VJ558P01758 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Igh-VJ558P01758 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Igh-VJ558P01758 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Igh-VJ558P01758 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igh-VJ558P01758 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Igh-VJ558P01758 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.47■□□□□ 0.71
Igh-VJ558P01758 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igh-VJ558P01758 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igh-VJ558P01758 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igh-VJ558P01758 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igh-VJ558P01758 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Igh-VJ558P01758 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igh-VJ558P01758 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igh-VJ558P01758 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igh-VJ558P01758 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.45■□□□□ 0.7
Igh-VJ558P01758 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igh-VJ558P01758 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igh-VJ558P01758 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igh-VJ558P01758 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Igh-VJ558P01758 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Igh-VJ558P01758 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igh-VJ558P01758 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igh-VJ558P01758 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Igh-VJ558P01758 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.43■□□□□ 0.7
Igh-VJ558P01758 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Igh-VJ558P01758 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.43■□□□□ 0.7
Igh-VJ558P01758 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Igh-VJ558P01758 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igh-VJ558P01758 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.43■□□□□ 0.7
Igh-VJ558P01758 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.42■□□□□ 0.7
Igh-VJ558P01758 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Igh-VJ558P01758 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Igh-VJ558P01758 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.42■□□□□ 0.7
Igh-VJ558P01758 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igh-VJ558P01758 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Igh-VJ558P01758 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igh-VJ558P01758 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms