Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Gm5921-201ENSMUST00000075898 882 ntBASIC24.87■■□□□ 1.57
Mtco1P00397 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Mtco1P00397 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Mtco1P00397 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Mtco1P00397 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Mtco1P00397 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Mtco1P00397 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Mtco1P00397 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.86■■□□□ 1.57
Mtco1P00397 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Mtco1P00397 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Mtco1P00397 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Mtco1P00397 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Mtco1P00397 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Mtco1P00397 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Mtco1P00397 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Mtco1P00397 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Mtco1P00397 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Mtco1P00397 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Mtco1P00397 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Mtco1P00397 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Mtco1P00397 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Mtco1P00397 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Mtco1P00397 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.8■■□□□ 1.56
Mtco1P00397 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Mtco1P00397 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Mtco1P00397 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Mtco1P00397 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Mtco1P00397 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Mtco1P00397 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Mtco1P00397 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Mtco1P00397 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Mtco1P00397 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Mtco1P00397 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Mtco1P00397 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Mtco1P00397 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Mtco1P00397 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Mtco1P00397 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Mtco1P00397 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.76■■□□□ 1.55
Mtco1P00397 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Mtco1P00397 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Mtco1P00397 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Mtco1P00397 Gm5812-201ENSMUST00000061073 957 ntBASIC24.75■■□□□ 1.55
Mtco1P00397 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Mtco1P00397 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Mtco1P00397 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.74■■□□□ 1.55
Mtco1P00397 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.74■■□□□ 1.55
Mtco1P00397 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Mtco1P00397 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Mtco1P00397 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Mtco1P00397 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.72■■□□□ 1.55
Mtco1P00397 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.72■■□□□ 1.55
Mtco1P00397 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Mtco1P00397 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.72■■□□□ 1.55
Mtco1P00397 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Mtco1P00397 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Mtco1P00397 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.71■■□□□ 1.55
Mtco1P00397 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Mtco1P00397 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Mtco1P00397 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Mtco1P00397 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Mtco1P00397 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Mtco1P00397 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Mtco1P00397 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
Mtco1P00397 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.7■■□□□ 1.54
Mtco1P00397 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.7■■□□□ 1.54
Mtco1P00397 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Mtco1P00397 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Mtco1P00397 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Mtco1P00397 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Mtco1P00397 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Mtco1P00397 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.69■■□□□ 1.54
Mtco1P00397 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Mtco1P00397 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
Mtco1P00397 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.67■■□□□ 1.54
Mtco1P00397 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Mtco1P00397 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Mtco1P00397 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Mtco1P00397 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Mtco1P00397 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Mtco1P00397 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Mtco1P00397 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.66■■□□□ 1.54
Mtco1P00397 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Mtco1P00397 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Mtco1P00397 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Mtco1P00397 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Mtco1P00397 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Mtco1P00397 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Mtco1P00397 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Mtco1P00397 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Mtco1P00397 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.64■■□□□ 1.53
Mtco1P00397 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Mtco1P00397 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.62■■□□□ 1.53
Mtco1P00397 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Mtco1P00397 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Mtco1P00397 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Mtco1P00397 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Mtco1P00397 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Mtco1P00397 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Mtco1P00397 Gm13238-201ENSMUST00000117655 780 ntBASIC24.61■■□□□ 1.53
Mtco1P00397 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms