Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.36■□□□□ 0.85
Alx3O70137 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx3O70137 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Alx3O70137 Gm8503-201ENSMUST00000118131 455 ntBASIC20.35■□□□□ 0.85
Alx3O70137 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx3O70137 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx3O70137 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx3O70137 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.34■□□□□ 0.85
Alx3O70137 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx3O70137 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx3O70137 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Alx3O70137 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx3O70137 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.33■□□□□ 0.85
Alx3O70137 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alx3O70137 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Alx3O70137 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx3O70137 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alx3O70137 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Alx3O70137 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.31■□□□□ 0.84
Alx3O70137 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx3O70137 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Alx3O70137 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Alx3O70137 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.3■□□□□ 0.84
Alx3O70137 Notumos-201ENSMUST00000151998 2659 ntBASIC20.3■□□□□ 0.84
Alx3O70137 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Alx3O70137 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx3O70137 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.3■□□□□ 0.84
Alx3O70137 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Alx3O70137 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx3O70137 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx3O70137 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx3O70137 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Alx3O70137 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alx3O70137 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx3O70137 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx3O70137 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx3O70137 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.28■□□□□ 0.84
Alx3O70137 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.28■□□□□ 0.84
Alx3O70137 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx3O70137 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alx3O70137 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alx3O70137 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alx3O70137 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Alx3O70137 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Alx3O70137 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.27■□□□□ 0.83
Alx3O70137 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Alx3O70137 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Alx3O70137 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx3O70137 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Alx3O70137 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx3O70137 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx3O70137 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Alx3O70137 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx3O70137 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alx3O70137 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx3O70137 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alx3O70137 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.25■□□□□ 0.83
Alx3O70137 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx3O70137 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx3O70137 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx3O70137 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx3O70137 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.24■□□□□ 0.83
Alx3O70137 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Alx3O70137 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alx3O70137 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx3O70137 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.23■□□□□ 0.83
Alx3O70137 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
Alx3O70137 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.23■□□□□ 0.83
Alx3O70137 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alx3O70137 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.23■□□□□ 0.83
Alx3O70137 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Alx3O70137 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx3O70137 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx3O70137 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx3O70137 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alx3O70137 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Alx3O70137 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alx3O70137 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Alx3O70137 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx3O70137 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx3O70137 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx3O70137 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alx3O70137 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Alx3O70137 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx3O70137 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alx3O70137 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Alx3O70137 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alx3O70137 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.18■□□□□ 0.82
Alx3O70137 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Alx3O70137 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx3O70137 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alx3O70137 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alx3O70137 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alx3O70137 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx3O70137 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alx3O70137 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx3O70137 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx3O70137 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alx3O70137 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Alx3O70137 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms