Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Efnb3O35393 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Efnb3O35393 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Efnb3O35393 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Efnb3O35393 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Efnb3O35393 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Efnb3O35393 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Efnb3O35393 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Efnb3O35393 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Efnb3O35393 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Efnb3O35393 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Efnb3O35393 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Efnb3O35393 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Efnb3O35393 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Efnb3O35393 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.74■□□□□ 0.43
Efnb3O35393 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Efnb3O35393 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Efnb3O35393 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Efnb3O35393 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.74■□□□□ 0.43
Efnb3O35393 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Efnb3O35393 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Efnb3O35393 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Efnb3O35393 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.73■□□□□ 0.43
Efnb3O35393 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Efnb3O35393 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Efnb3O35393 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.73■□□□□ 0.43
Efnb3O35393 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Efnb3O35393 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Efnb3O35393 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Efnb3O35393 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Efnb3O35393 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Efnb3O35393 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Efnb3O35393 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Efnb3O35393 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Efnb3O35393 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.72■□□□□ 0.43
Efnb3O35393 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Efnb3O35393 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.71■□□□□ 0.43
Efnb3O35393 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Efnb3O35393 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Efnb3O35393 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Efnb3O35393 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Efnb3O35393 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Efnb3O35393 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.7■□□□□ 0.42
Efnb3O35393 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Efnb3O35393 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Efnb3O35393 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.7■□□□□ 0.42
Efnb3O35393 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Efnb3O35393 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Efnb3O35393 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Efnb3O35393 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Efnb3O35393 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Efnb3O35393 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Efnb3O35393 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Efnb3O35393 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Efnb3O35393 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Efnb3O35393 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.68■□□□□ 0.42
Efnb3O35393 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Efnb3O35393 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Efnb3O35393 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Efnb3O35393 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.67■□□□□ 0.42
Efnb3O35393 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Efnb3O35393 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Efnb3O35393 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Efnb3O35393 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Efnb3O35393 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Efnb3O35393 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Efnb3O35393 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Efnb3O35393 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Efnb3O35393 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Efnb3O35393 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Efnb3O35393 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Efnb3O35393 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Efnb3O35393 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Efnb3O35393 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Efnb3O35393 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Efnb3O35393 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.64■□□□□ 0.41
Efnb3O35393 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Efnb3O35393 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Efnb3O35393 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Efnb3O35393 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Efnb3O35393 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Efnb3O35393 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.62■□□□□ 0.41
Efnb3O35393 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Efnb3O35393 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Efnb3O35393 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Efnb3O35393 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Efnb3O35393 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Efnb3O35393 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Efnb3O35393 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Efnb3O35393 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Efnb3O35393 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Efnb3O35393 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Efnb3O35393 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Efnb3O35393 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Efnb3O35393 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Efnb3O35393 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Efnb3O35393 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Efnb3O35393 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Efnb3O35393 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Efnb3O35393 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms