Protein–RNA interactions for Protein: O35228

Ebi3, Interleukin-27 subunit beta, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebi3O35228 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebi3O35228 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ebi3O35228 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ebi3O35228 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebi3O35228 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebi3O35228 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebi3O35228 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.26■□□□□ 0.35
Ebi3O35228 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebi3O35228 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.26■□□□□ 0.35
Ebi3O35228 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebi3O35228 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebi3O35228 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebi3O35228 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebi3O35228 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ebi3O35228 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ebi3O35228 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ebi3O35228 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ebi3O35228 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.25■□□□□ 0.35
Ebi3O35228 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ebi3O35228 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.25■□□□□ 0.35
Ebi3O35228 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebi3O35228 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ebi3O35228 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ebi3O35228 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ebi3O35228 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebi3O35228 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ebi3O35228 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ebi3O35228 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ebi3O35228 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebi3O35228 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebi3O35228 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebi3O35228 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ebi3O35228 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.22■□□□□ 0.35
Ebi3O35228 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebi3O35228 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebi3O35228 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.22■□□□□ 0.35
Ebi3O35228 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebi3O35228 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ebi3O35228 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ebi3O35228 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.21■□□□□ 0.35
Ebi3O35228 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ebi3O35228 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebi3O35228 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebi3O35228 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ebi3O35228 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ebi3O35228 Mir3960-201ENSMUST00000198213 73 ntBASIC17.21■□□□□ 0.35
Ebi3O35228 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.21■□□□□ 0.35
Ebi3O35228 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.21■□□□□ 0.35
Ebi3O35228 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ebi3O35228 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebi3O35228 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebi3O35228 Gm11599-201ENSMUST00000118720 878 ntBASIC17.2■□□□□ 0.34
Ebi3O35228 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebi3O35228 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.2■□□□□ 0.34
Ebi3O35228 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ebi3O35228 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.19■□□□□ 0.34
Ebi3O35228 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebi3O35228 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.19■□□□□ 0.34
Ebi3O35228 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebi3O35228 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ebi3O35228 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebi3O35228 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ebi3O35228 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebi3O35228 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.18■□□□□ 0.34
Ebi3O35228 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.18■□□□□ 0.34
Ebi3O35228 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ebi3O35228 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebi3O35228 Gm45364-201ENSMUST00000210883 159 ntBASIC17.17■□□□□ 0.34
Ebi3O35228 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebi3O35228 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.17■□□□□ 0.34
Ebi3O35228 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebi3O35228 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebi3O35228 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebi3O35228 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ebi3O35228 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.15■□□□□ 0.34
Ebi3O35228 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebi3O35228 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.15■□□□□ 0.34
Ebi3O35228 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebi3O35228 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.15■□□□□ 0.34
Ebi3O35228 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebi3O35228 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebi3O35228 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ebi3O35228 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebi3O35228 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ebi3O35228 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.14■□□□□ 0.33
Ebi3O35228 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebi3O35228 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ebi3O35228 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ebi3O35228 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.14■□□□□ 0.33
Ebi3O35228 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ebi3O35228 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ebi3O35228 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebi3O35228 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ebi3O35228 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ebi3O35228 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.13■□□□□ 0.33
Ebi3O35228 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ebi3O35228 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ebi3O35228 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ebi3O35228 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ebi3O35228 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms