Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.29■□□□□ 0.36
MsmbO08540 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MsmbO08540 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MsmbO08540 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MsmbO08540 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MsmbO08540 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MsmbO08540 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MsmbO08540 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MsmbO08540 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MsmbO08540 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MsmbO08540 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MsmbO08540 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MsmbO08540 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MsmbO08540 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MsmbO08540 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.28■□□□□ 0.36
MsmbO08540 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MsmbO08540 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.28■□□□□ 0.36
MsmbO08540 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MsmbO08540 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MsmbO08540 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MsmbO08540 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.27■□□□□ 0.36
MsmbO08540 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.27■□□□□ 0.36
MsmbO08540 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MsmbO08540 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MsmbO08540 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MsmbO08540 Cap2-205ENSMUST00000225824 1634 ntBASIC17.27■□□□□ 0.36
MsmbO08540 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MsmbO08540 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.27■□□□□ 0.35
MsmbO08540 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
MsmbO08540 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
MsmbO08540 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MsmbO08540 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MsmbO08540 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MsmbO08540 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MsmbO08540 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
MsmbO08540 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.25■□□□□ 0.35
MsmbO08540 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MsmbO08540 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MsmbO08540 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MsmbO08540 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MsmbO08540 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.24■□□□□ 0.35
MsmbO08540 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MsmbO08540 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MsmbO08540 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MsmbO08540 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MsmbO08540 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MsmbO08540 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MsmbO08540 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MsmbO08540 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
MsmbO08540 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.23■□□□□ 0.35
MsmbO08540 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MsmbO08540 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MsmbO08540 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
MsmbO08540 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MsmbO08540 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MsmbO08540 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MsmbO08540 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MsmbO08540 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MsmbO08540 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MsmbO08540 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.21■□□□□ 0.35
MsmbO08540 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MsmbO08540 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MsmbO08540 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MsmbO08540 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MsmbO08540 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MsmbO08540 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MsmbO08540 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MsmbO08540 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.2■□□□□ 0.34
MsmbO08540 Gm12366-201ENSMUST00000121722 873 ntBASIC17.2■□□□□ 0.34
MsmbO08540 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.2■□□□□ 0.34
MsmbO08540 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.2■□□□□ 0.34
MsmbO08540 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.2■□□□□ 0.34
MsmbO08540 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.2■□□□□ 0.34
MsmbO08540 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MsmbO08540 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MsmbO08540 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MsmbO08540 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.2■□□□□ 0.34
MsmbO08540 Gm5786-201ENSMUST00000085368 882 ntBASIC17.2■□□□□ 0.34
MsmbO08540 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MsmbO08540 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MsmbO08540 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MsmbO08540 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MsmbO08540 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MsmbO08540 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MsmbO08540 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MsmbO08540 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MsmbO08540 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MsmbO08540 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.18■□□□□ 0.34
MsmbO08540 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MsmbO08540 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MsmbO08540 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MsmbO08540 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MsmbO08540 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MsmbO08540 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MsmbO08540 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MsmbO08540 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MsmbO08540 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MsmbO08540 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MsmbO08540 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MsmbO08540 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms