Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sgo2bJ3QMK1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Sgo2bJ3QMK1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.39■■□□□ 1.17
Sgo2bJ3QMK1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Sgo2bJ3QMK1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sgo2bJ3QMK1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.38■■□□□ 1.17
Sgo2bJ3QMK1 Gm45364-201ENSMUST00000210883 159 ntBASIC22.38■■□□□ 1.17
Sgo2bJ3QMK1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.38■■□□□ 1.17
Sgo2bJ3QMK1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sgo2bJ3QMK1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sgo2bJ3QMK1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sgo2bJ3QMK1 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.37■■□□□ 1.17
Sgo2bJ3QMK1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sgo2bJ3QMK1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.37■■□□□ 1.17
Sgo2bJ3QMK1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sgo2bJ3QMK1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Sgo2bJ3QMK1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.37■■□□□ 1.17
Sgo2bJ3QMK1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Sgo2bJ3QMK1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sgo2bJ3QMK1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sgo2bJ3QMK1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.36■■□□□ 1.17
Sgo2bJ3QMK1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sgo2bJ3QMK1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sgo2bJ3QMK1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sgo2bJ3QMK1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sgo2bJ3QMK1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sgo2bJ3QMK1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sgo2bJ3QMK1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Sgo2bJ3QMK1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sgo2bJ3QMK1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Sgo2bJ3QMK1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sgo2bJ3QMK1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sgo2bJ3QMK1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sgo2bJ3QMK1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.33■■□□□ 1.17
Sgo2bJ3QMK1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Sgo2bJ3QMK1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.33■■□□□ 1.16
Sgo2bJ3QMK1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.32■■□□□ 1.16
Sgo2bJ3QMK1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgo2bJ3QMK1 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.32■■□□□ 1.16
Sgo2bJ3QMK1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.32■■□□□ 1.16
Sgo2bJ3QMK1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgo2bJ3QMK1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sgo2bJ3QMK1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sgo2bJ3QMK1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sgo2bJ3QMK1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sgo2bJ3QMK1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sgo2bJ3QMK1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sgo2bJ3QMK1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sgo2bJ3QMK1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sgo2bJ3QMK1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Sgo2bJ3QMK1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sgo2bJ3QMK1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sgo2bJ3QMK1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.3■■□□□ 1.16
Sgo2bJ3QMK1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.29■■□□□ 1.16
Sgo2bJ3QMK1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sgo2bJ3QMK1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.28■■□□□ 1.16
Sgo2bJ3QMK1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sgo2bJ3QMK1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sgo2bJ3QMK1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sgo2bJ3QMK1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sgo2bJ3QMK1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.27■■□□□ 1.16
Sgo2bJ3QMK1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sgo2bJ3QMK1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sgo2bJ3QMK1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.26■■□□□ 1.15
Sgo2bJ3QMK1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Sgo2bJ3QMK1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sgo2bJ3QMK1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sgo2bJ3QMK1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sgo2bJ3QMK1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sgo2bJ3QMK1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sgo2bJ3QMK1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sgo2bJ3QMK1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sgo2bJ3QMK1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Sgo2bJ3QMK1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.24■■□□□ 1.15
Sgo2bJ3QMK1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sgo2bJ3QMK1 Terc-201ENSMUST00000082862 423 ntBASIC22.24■■□□□ 1.15
Sgo2bJ3QMK1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sgo2bJ3QMK1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.23■■□□□ 1.15
Sgo2bJ3QMK1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgo2bJ3QMK1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Sgo2bJ3QMK1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sgo2bJ3QMK1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sgo2bJ3QMK1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
Sgo2bJ3QMK1 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.22■■□□□ 1.15
Sgo2bJ3QMK1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sgo2bJ3QMK1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sgo2bJ3QMK1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sgo2bJ3QMK1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sgo2bJ3QMK1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sgo2bJ3QMK1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Sgo2bJ3QMK1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sgo2bJ3QMK1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.2■■□□□ 1.15
Sgo2bJ3QMK1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
Sgo2bJ3QMK1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sgo2bJ3QMK1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Sgo2bJ3QMK1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.2■■□□□ 1.14
Sgo2bJ3QMK1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sgo2bJ3QMK1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sgo2bJ3QMK1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sgo2bJ3QMK1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms