Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm10232-201ENSMUST00000089221 720 ntBASIC23.8■■□□□ 1.4
Ccdc188F6WEU2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc188F6WEU2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc188F6WEU2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc188F6WEU2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ccdc188F6WEU2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc188F6WEU2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc188F6WEU2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc188F6WEU2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Ccdc188F6WEU2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc188F6WEU2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc188F6WEU2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc188F6WEU2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc188F6WEU2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc188F6WEU2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc188F6WEU2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc188F6WEU2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.77■■□□□ 1.4
Ccdc188F6WEU2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.77■■□□□ 1.4
Ccdc188F6WEU2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.76■■□□□ 1.39
Ccdc188F6WEU2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.76■■□□□ 1.39
Ccdc188F6WEU2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc188F6WEU2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc188F6WEU2 Gm9847-201ENSMUST00000052528 599 ntBASIC23.75■■□□□ 1.39
Ccdc188F6WEU2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc188F6WEU2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc188F6WEU2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.74■■□□□ 1.39
Ccdc188F6WEU2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc188F6WEU2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc188F6WEU2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc188F6WEU2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc188F6WEU2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc188F6WEU2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.73■■□□□ 1.39
Ccdc188F6WEU2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc188F6WEU2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc188F6WEU2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc188F6WEU2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc188F6WEU2 Gm29257-201ENSMUST00000186115 639 ntBASIC23.7■■□□□ 1.38
Ccdc188F6WEU2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.7■■□□□ 1.38
Ccdc188F6WEU2 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.7■■□□□ 1.38
Ccdc188F6WEU2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Ccdc188F6WEU2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc188F6WEU2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc188F6WEU2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc188F6WEU2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.67■■□□□ 1.38
Ccdc188F6WEU2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc188F6WEU2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc188F6WEU2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc188F6WEU2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ccdc188F6WEU2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ccdc188F6WEU2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.65■■□□□ 1.38
Ccdc188F6WEU2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc188F6WEU2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ccdc188F6WEU2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Ccdc188F6WEU2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc188F6WEU2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc188F6WEU2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.63■■□□□ 1.37
Ccdc188F6WEU2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.63■■□□□ 1.37
Ccdc188F6WEU2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ccdc188F6WEU2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ccdc188F6WEU2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ccdc188F6WEU2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ccdc188F6WEU2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ccdc188F6WEU2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ccdc188F6WEU2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ccdc188F6WEU2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ccdc188F6WEU2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ccdc188F6WEU2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ccdc188F6WEU2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ccdc188F6WEU2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ccdc188F6WEU2 Gm7417-201ENSMUST00000192950 473 ntBASIC23.6■■□□□ 1.37
Ccdc188F6WEU2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.59■■□□□ 1.37
Ccdc188F6WEU2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ccdc188F6WEU2 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.58■■□□□ 1.37
Ccdc188F6WEU2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ccdc188F6WEU2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Ccdc188F6WEU2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ccdc188F6WEU2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ccdc188F6WEU2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ccdc188F6WEU2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ccdc188F6WEU2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Ccdc188F6WEU2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ccdc188F6WEU2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ccdc188F6WEU2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ccdc188F6WEU2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ccdc188F6WEU2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.55■■□□□ 1.36
Ccdc188F6WEU2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.55■■□□□ 1.36
Ccdc188F6WEU2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ccdc188F6WEU2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
Ccdc188F6WEU2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ccdc188F6WEU2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ccdc188F6WEU2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ccdc188F6WEU2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ccdc188F6WEU2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.53■■□□□ 1.36
Ccdc188F6WEU2 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.53■■□□□ 1.36
Ccdc188F6WEU2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.52■■□□□ 1.36
Ccdc188F6WEU2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
Ccdc188F6WEU2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ccdc188F6WEU2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ccdc188F6WEU2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ccdc188F6WEU2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms