Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Pramef20B1ARV6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pramef20B1ARV6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pramef20B1ARV6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.99■■□□□ 1.11
Pramef20B1ARV6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pramef20B1ARV6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pramef20B1ARV6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pramef20B1ARV6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pramef20B1ARV6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pramef20B1ARV6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pramef20B1ARV6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.98■■□□□ 1.11
Pramef20B1ARV6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pramef20B1ARV6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pramef20B1ARV6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pramef20B1ARV6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pramef20B1ARV6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pramef20B1ARV6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.96■■□□□ 1.11
Pramef20B1ARV6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pramef20B1ARV6 Gm27502-201ENSMUST00000183495 199 ntBASIC21.96■■□□□ 1.11
Pramef20B1ARV6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Pramef20B1ARV6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pramef20B1ARV6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pramef20B1ARV6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.95■■□□□ 1.1
Pramef20B1ARV6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pramef20B1ARV6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pramef20B1ARV6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pramef20B1ARV6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.95■■□□□ 1.1
Pramef20B1ARV6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pramef20B1ARV6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pramef20B1ARV6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.94■■□□□ 1.1
Pramef20B1ARV6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pramef20B1ARV6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.94■■□□□ 1.1
Pramef20B1ARV6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pramef20B1ARV6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.94■■□□□ 1.1
Pramef20B1ARV6 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.94■■□□□ 1.1
Pramef20B1ARV6 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.94■■□□□ 1.1
Pramef20B1ARV6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pramef20B1ARV6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pramef20B1ARV6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pramef20B1ARV6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pramef20B1ARV6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pramef20B1ARV6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pramef20B1ARV6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Pramef20B1ARV6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
Pramef20B1ARV6 Gm9812-201ENSMUST00000061934 968 ntBASIC21.92■■□□□ 1.1
Pramef20B1ARV6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pramef20B1ARV6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pramef20B1ARV6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pramef20B1ARV6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pramef20B1ARV6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.91■■□□□ 1.1
Pramef20B1ARV6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.91■■□□□ 1.1
Pramef20B1ARV6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pramef20B1ARV6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pramef20B1ARV6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pramef20B1ARV6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pramef20B1ARV6 Gm7332-201ENSMUST00000118351 454 ntBASIC21.9■■□□□ 1.1
Pramef20B1ARV6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Pramef20B1ARV6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pramef20B1ARV6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pramef20B1ARV6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pramef20B1ARV6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pramef20B1ARV6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pramef20B1ARV6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pramef20B1ARV6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pramef20B1ARV6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pramef20B1ARV6 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.89■■□□□ 1.09
Pramef20B1ARV6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Pramef20B1ARV6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pramef20B1ARV6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pramef20B1ARV6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pramef20B1ARV6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pramef20B1ARV6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pramef20B1ARV6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pramef20B1ARV6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pramef20B1ARV6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Pramef20B1ARV6 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.87■■□□□ 1.09
Pramef20B1ARV6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pramef20B1ARV6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pramef20B1ARV6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pramef20B1ARV6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pramef20B1ARV6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pramef20B1ARV6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pramef20B1ARV6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pramef20B1ARV6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pramef20B1ARV6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.86■■□□□ 1.09
Pramef20B1ARV6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Pramef20B1ARV6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pramef20B1ARV6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pramef20B1ARV6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pramef20B1ARV6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pramef20B1ARV6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pramef20B1ARV6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pramef20B1ARV6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pramef20B1ARV6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pramef20B1ARV6 Gm14523-201ENSMUST00000117260 558 ntBASIC21.84■■□□□ 1.09
Pramef20B1ARV6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pramef20B1ARV6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pramef20B1ARV6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pramef20B1ARV6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Pramef20B1ARV6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms