Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm11127A7VMS2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm11127A7VMS2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Gm11127A7VMS2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.83■□□□□ 0.77
Gm11127A7VMS2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gm11127A7VMS2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm11127A7VMS2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm11127A7VMS2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.83■□□□□ 0.76
Gm11127A7VMS2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Gm11127A7VMS2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm11127A7VMS2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm11127A7VMS2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm11127A7VMS2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm11127A7VMS2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm11127A7VMS2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm11127A7VMS2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm11127A7VMS2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm11127A7VMS2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm11127A7VMS2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm11127A7VMS2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm11127A7VMS2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm11127A7VMS2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm11127A7VMS2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm11127A7VMS2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm11127A7VMS2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm11127A7VMS2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Gm11127A7VMS2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm11127A7VMS2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm11127A7VMS2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm11127A7VMS2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.79■□□□□ 0.76
Gm11127A7VMS2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Gm11127A7VMS2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm11127A7VMS2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm11127A7VMS2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm11127A7VMS2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm11127A7VMS2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm11127A7VMS2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.78■□□□□ 0.76
Gm11127A7VMS2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm11127A7VMS2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm11127A7VMS2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Gm11127A7VMS2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm11127A7VMS2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm11127A7VMS2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm11127A7VMS2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm11127A7VMS2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm11127A7VMS2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm11127A7VMS2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.75■□□□□ 0.75
Gm11127A7VMS2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm11127A7VMS2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.73■□□□□ 0.75
Gm11127A7VMS2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm11127A7VMS2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm11127A7VMS2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Gm11127A7VMS2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm11127A7VMS2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm11127A7VMS2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.71■□□□□ 0.75
Gm11127A7VMS2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm11127A7VMS2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm11127A7VMS2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm11127A7VMS2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm11127A7VMS2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm11127A7VMS2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm11127A7VMS2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm11127A7VMS2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Gm11127A7VMS2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm11127A7VMS2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm11127A7VMS2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Nkain2-201ENSMUST00000092602 558 ntBASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm11127A7VMS2 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.67■□□□□ 0.74
Gm11127A7VMS2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.67■□□□□ 0.74
Gm11127A7VMS2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm11127A7VMS2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm11127A7VMS2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm11127A7VMS2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Gm11127A7VMS2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm11127A7VMS2 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.65■□□□□ 0.74
Gm11127A7VMS2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm11127A7VMS2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm11127A7VMS2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm11127A7VMS2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm11127A7VMS2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms