Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ttc39aA2ACP1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.06■■□□□ 1.12
Ttc39aA2ACP1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ttc39aA2ACP1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.06■■□□□ 1.12
Ttc39aA2ACP1 Gm5812-201ENSMUST00000061073 957 ntBASIC22.06■■□□□ 1.12
Ttc39aA2ACP1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Ttc39aA2ACP1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ttc39aA2ACP1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ttc39aA2ACP1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.04■■□□□ 1.12
Ttc39aA2ACP1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ttc39aA2ACP1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ttc39aA2ACP1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ttc39aA2ACP1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ttc39aA2ACP1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ttc39aA2ACP1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ttc39aA2ACP1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ttc39aA2ACP1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
Ttc39aA2ACP1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ttc39aA2ACP1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ttc39aA2ACP1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc39aA2ACP1 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.01■■□□□ 1.11
Ttc39aA2ACP1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ttc39aA2ACP1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Ttc39aA2ACP1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22■■□□□ 1.11
Ttc39aA2ACP1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ttc39aA2ACP1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ttc39aA2ACP1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ttc39aA2ACP1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ttc39aA2ACP1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ttc39aA2ACP1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.99■■□□□ 1.11
Ttc39aA2ACP1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ttc39aA2ACP1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc39aA2ACP1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc39aA2ACP1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.98■■□□□ 1.11
Ttc39aA2ACP1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc39aA2ACP1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ttc39aA2ACP1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ttc39aA2ACP1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
Ttc39aA2ACP1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ttc39aA2ACP1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ttc39aA2ACP1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.96■■□□□ 1.11
Ttc39aA2ACP1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc39aA2ACP1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ttc39aA2ACP1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Ttc39aA2ACP1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.95■■□□□ 1.1
Ttc39aA2ACP1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ttc39aA2ACP1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ttc39aA2ACP1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ttc39aA2ACP1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ttc39aA2ACP1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc39aA2ACP1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.94■■□□□ 1.1
Ttc39aA2ACP1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc39aA2ACP1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc39aA2ACP1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ttc39aA2ACP1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ttc39aA2ACP1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc39aA2ACP1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc39aA2ACP1 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.92■■□□□ 1.1
Ttc39aA2ACP1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ttc39aA2ACP1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc39aA2ACP1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ttc39aA2ACP1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ttc39aA2ACP1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.91■■□□□ 1.1
Ttc39aA2ACP1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ttc39aA2ACP1 Gm15546-201ENSMUST00000122095 826 ntBASIC21.91■■□□□ 1.1
Ttc39aA2ACP1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ttc39aA2ACP1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.91■■□□□ 1.1
Ttc39aA2ACP1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ttc39aA2ACP1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ttc39aA2ACP1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ttc39aA2ACP1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ttc39aA2ACP1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ttc39aA2ACP1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ttc39aA2ACP1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ttc39aA2ACP1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc39aA2ACP1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Ttc39aA2ACP1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc39aA2ACP1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ttc39aA2ACP1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.87■■□□□ 1.09
Ttc39aA2ACP1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc39aA2ACP1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc39aA2ACP1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ttc39aA2ACP1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ttc39aA2ACP1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.86■■□□□ 1.09
Ttc39aA2ACP1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.86■■□□□ 1.09
Ttc39aA2ACP1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ttc39aA2ACP1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ttc39aA2ACP1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc39aA2ACP1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc39aA2ACP1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.85■■□□□ 1.09
Ttc39aA2ACP1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ttc39aA2ACP1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
Ttc39aA2ACP1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.85■■□□□ 1.09
Ttc39aA2ACP1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ttc39aA2ACP1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ttc39aA2ACP1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ttc39aA2ACP1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ttc39aA2ACP1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ttc39aA2ACP1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ttc39aA2ACP1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms