Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav12d-1A0N8R0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12d-1A0N8R0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12d-1A0N8R0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav12d-1A0N8R0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-1A0N8R0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-1A0N8R0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-1A0N8R0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trav12d-1A0N8R0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-1A0N8R0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.1■□□□□ 0.49
Trav12d-1A0N8R0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-1A0N8R0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav12d-1A0N8R0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12d-1A0N8R0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.09■□□□□ 0.49
Trav12d-1A0N8R0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav12d-1A0N8R0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav12d-1A0N8R0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12d-1A0N8R0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav12d-1A0N8R0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav12d-1A0N8R0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.08■□□□□ 0.49
Trav12d-1A0N8R0 Nkain2-201ENSMUST00000092602 558 ntBASIC18.08■□□□□ 0.48
Trav12d-1A0N8R0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12d-1A0N8R0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12d-1A0N8R0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12d-1A0N8R0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12d-1A0N8R0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav12d-1A0N8R0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav12d-1A0N8R0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12d-1A0N8R0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav12d-1A0N8R0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12d-1A0N8R0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12d-1A0N8R0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav12d-1A0N8R0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav12d-1A0N8R0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Trav12d-1A0N8R0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav12d-1A0N8R0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12d-1A0N8R0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav12d-1A0N8R0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12d-1A0N8R0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav12d-1A0N8R0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12d-1A0N8R0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12d-1A0N8R0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12d-1A0N8R0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav12d-1A0N8R0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Trav12d-1A0N8R0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12d-1A0N8R0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12d-1A0N8R0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12d-1A0N8R0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav12d-1A0N8R0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav12d-1A0N8R0 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.04■□□□□ 0.48
Trav12d-1A0N8R0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav12d-1A0N8R0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12d-1A0N8R0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav12d-1A0N8R0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav12d-1A0N8R0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav12d-1A0N8R0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav12d-1A0N8R0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav12d-1A0N8R0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav12d-1A0N8R0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav12d-1A0N8R0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav12d-1A0N8R0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav12d-1A0N8R0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav12d-1A0N8R0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav12d-1A0N8R0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav12d-1A0N8R0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav12d-1A0N8R0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trav12d-1A0N8R0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav12d-1A0N8R0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav12d-1A0N8R0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav12d-1A0N8R0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav12d-1A0N8R0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav12d-1A0N8R0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav12d-1A0N8R0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trav12d-1A0N8R0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trav12d-1A0N8R0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-1A0N8R0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-1A0N8R0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-1A0N8R0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-1A0N8R0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-1A0N8R0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-1A0N8R0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-1A0N8R0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav12d-1A0N8R0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav12d-1A0N8R0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12d-1A0N8R0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12d-1A0N8R0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12d-1A0N8R0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav12d-1A0N8R0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav12d-1A0N8R0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Trav12d-1A0N8R0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-1A0N8R0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-1A0N8R0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-1A0N8R0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav12d-1A0N8R0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-1A0N8R0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-1A0N8R0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav12d-1A0N8R0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav12d-1A0N8R0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav12d-1A0N8R0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav12d-1A0N8R0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms