Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trav12-2A0N8N6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav12-2A0N8N6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav12-2A0N8N6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav12-2A0N8N6 Gm7432-201ENSMUST00000210343 879 ntBASIC19.84■□□□□ 0.77
Trav12-2A0N8N6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.84■□□□□ 0.77
Trav12-2A0N8N6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.84■□□□□ 0.77
Trav12-2A0N8N6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav12-2A0N8N6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav12-2A0N8N6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trav12-2A0N8N6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav12-2A0N8N6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav12-2A0N8N6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav12-2A0N8N6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.83■□□□□ 0.76
Trav12-2A0N8N6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav12-2A0N8N6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav12-2A0N8N6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav12-2A0N8N6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trav12-2A0N8N6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Trav12-2A0N8N6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav12-2A0N8N6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav12-2A0N8N6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trav12-2A0N8N6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav12-2A0N8N6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav12-2A0N8N6 Gm9812-201ENSMUST00000061934 968 ntBASIC19.81■□□□□ 0.76
Trav12-2A0N8N6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav12-2A0N8N6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav12-2A0N8N6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav12-2A0N8N6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav12-2A0N8N6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trav12-2A0N8N6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trav12-2A0N8N6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav12-2A0N8N6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trav12-2A0N8N6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav12-2A0N8N6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trav12-2A0N8N6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav12-2A0N8N6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trav12-2A0N8N6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav12-2A0N8N6 Gm11599-201ENSMUST00000118720 878 ntBASIC19.78■□□□□ 0.76
Trav12-2A0N8N6 Mir3960-201ENSMUST00000198213 73 ntBASIC19.78■□□□□ 0.76
Trav12-2A0N8N6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.78■□□□□ 0.76
Trav12-2A0N8N6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav12-2A0N8N6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav12-2A0N8N6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav12-2A0N8N6 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.77■□□□□ 0.76
Trav12-2A0N8N6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trav12-2A0N8N6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-2A0N8N6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-2A0N8N6 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.76■□□□□ 0.75
Trav12-2A0N8N6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-2A0N8N6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.76■□□□□ 0.75
Trav12-2A0N8N6 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.76■□□□□ 0.75
Trav12-2A0N8N6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav12-2A0N8N6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trav12-2A0N8N6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12-2A0N8N6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trav12-2A0N8N6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12-2A0N8N6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.75■□□□□ 0.75
Trav12-2A0N8N6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12-2A0N8N6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12-2A0N8N6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12-2A0N8N6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav12-2A0N8N6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12-2A0N8N6 Gm45364-201ENSMUST00000210883 159 ntBASIC19.74■□□□□ 0.75
Trav12-2A0N8N6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav12-2A0N8N6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav12-2A0N8N6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12-2A0N8N6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trav12-2A0N8N6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12-2A0N8N6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12-2A0N8N6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-2A0N8N6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-2A0N8N6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-2A0N8N6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-2A0N8N6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12-2A0N8N6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12-2A0N8N6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trav12-2A0N8N6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.7■□□□□ 0.74
Trav12-2A0N8N6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trav12-2A0N8N6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12-2A0N8N6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.69■□□□□ 0.74
Trav12-2A0N8N6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trav12-2A0N8N6 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.69■□□□□ 0.74
Trav12-2A0N8N6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.69■□□□□ 0.74
Trav12-2A0N8N6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav12-2A0N8N6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav12-2A0N8N6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav12-2A0N8N6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav12-2A0N8N6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12-2A0N8N6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trav12-2A0N8N6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trav12-2A0N8N6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12-2A0N8N6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12-2A0N8N6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.68■□□□□ 0.74
Trav12-2A0N8N6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12-2A0N8N6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12-2A0N8N6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Trav12-2A0N8N6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12-2A0N8N6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12-2A0N8N6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms