Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv1-88A0A140T8N1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv1-88A0A140T8N1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Igkv1-88A0A140T8N1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC14.75□□□□□ -0.05
Igkv1-88A0A140T8N1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv1-88A0A140T8N1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv1-88A0A140T8N1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv1-88A0A140T8N1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv1-88A0A140T8N1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv1-88A0A140T8N1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv1-88A0A140T8N1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Igkv1-88A0A140T8N1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv1-88A0A140T8N1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Igkv1-88A0A140T8N1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv1-88A0A140T8N1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv1-88A0A140T8N1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Igkv1-88A0A140T8N1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Igkv1-88A0A140T8N1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Igkv1-88A0A140T8N1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv1-88A0A140T8N1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.7□□□□□ -0.06
Igkv1-88A0A140T8N1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv1-88A0A140T8N1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv1-88A0A140T8N1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Igkv1-88A0A140T8N1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Igkv1-88A0A140T8N1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv1-88A0A140T8N1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv1-88A0A140T8N1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv1-88A0A140T8N1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv1-88A0A140T8N1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv1-88A0A140T8N1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Igkv1-88A0A140T8N1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv1-88A0A140T8N1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv1-88A0A140T8N1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv1-88A0A140T8N1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv1-88A0A140T8N1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Igkv1-88A0A140T8N1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC14.66□□□□□ -0.06
Igkv1-88A0A140T8N1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv1-88A0A140T8N1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv1-88A0A140T8N1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Igkv1-88A0A140T8N1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms