Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv8-30A0A140T8M3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv8-30A0A140T8M3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv8-30A0A140T8M3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv8-30A0A140T8M3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC14.31□□□□□ -0.12
Igkv8-30A0A140T8M3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv8-30A0A140T8M3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv8-30A0A140T8M3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv8-30A0A140T8M3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv8-30A0A140T8M3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv8-30A0A140T8M3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv8-30A0A140T8M3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv8-30A0A140T8M3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv8-30A0A140T8M3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv8-30A0A140T8M3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv8-30A0A140T8M3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.29□□□□□ -0.12
Igkv8-30A0A140T8M3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv8-30A0A140T8M3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv8-30A0A140T8M3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv8-30A0A140T8M3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv8-30A0A140T8M3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Igkv8-30A0A140T8M3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Igkv8-30A0A140T8M3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Igkv8-30A0A140T8M3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.27□□□□□ -0.12
Igkv8-30A0A140T8M3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Igkv8-30A0A140T8M3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Igkv8-30A0A140T8M3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Igkv8-30A0A140T8M3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.27□□□□□ -0.13
Igkv8-30A0A140T8M3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.27□□□□□ -0.13
Igkv8-30A0A140T8M3 Gm6934-201ENSMUST00000194780 1905 ntBASIC14.27□□□□□ -0.13
Igkv8-30A0A140T8M3 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.26□□□□□ -0.13
Igkv8-30A0A140T8M3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv8-30A0A140T8M3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC14.26□□□□□ -0.13
Igkv8-30A0A140T8M3 Gm26115-201ENSMUST00000175605 87 ntBASIC14.26□□□□□ -0.13
Igkv8-30A0A140T8M3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv8-30A0A140T8M3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Igkv8-30A0A140T8M3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Igkv8-30A0A140T8M3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv8-30A0A140T8M3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Igkv8-30A0A140T8M3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv8-30A0A140T8M3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv8-30A0A140T8M3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Igkv8-30A0A140T8M3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv8-30A0A140T8M3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Igkv8-30A0A140T8M3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv8-30A0A140T8M3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Igkv8-30A0A140T8M3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Igkv8-30A0A140T8M3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv8-30A0A140T8M3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-30A0A140T8M3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-30A0A140T8M3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-30A0A140T8M3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-30A0A140T8M3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-30A0A140T8M3 Peli2-204ENSMUST00000226513 1320 ntBASIC14.23□□□□□ -0.13
Igkv8-30A0A140T8M3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-30A0A140T8M3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-30A0A140T8M3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv8-30A0A140T8M3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-30A0A140T8M3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-30A0A140T8M3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-30A0A140T8M3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-30A0A140T8M3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Igkv8-30A0A140T8M3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-30A0A140T8M3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-30A0A140T8M3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv8-30A0A140T8M3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-30A0A140T8M3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-30A0A140T8M3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-30A0A140T8M3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-30A0A140T8M3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-30A0A140T8M3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-30A0A140T8M3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-30A0A140T8M3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv8-30A0A140T8M3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.21□□□□□ -0.13
Igkv8-30A0A140T8M3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Igkv8-30A0A140T8M3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Igkv8-30A0A140T8M3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms