Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv2-1A0A0G2JGB9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv2-1A0A0G2JGB9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.49■□□□□ 0.23
Trdv2-1A0A0G2JGB9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Gm8109-201ENSMUST00000194076 746 ntBASIC16.48■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trdv2-1A0A0G2JGB9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv2-1A0A0G2JGB9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.47■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.47■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdv2-1A0A0G2JGB9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.42■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.4■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.4■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Trdv2-1A0A0G2JGB9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdv2-1A0A0G2JGB9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv2-1A0A0G2JGB9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.36■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Gm16148-201ENSMUST00000119653 893 ntBASIC16.36■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv2-1A0A0G2JGB9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms