Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav13n-4A0A0G2JG01 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav13n-4A0A0G2JG01 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13n-4A0A0G2JG01 Gm9806-201ENSMUST00000051080 552 ntBASIC18.07■□□□□ 0.48
Trav13n-4A0A0G2JG01 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13n-4A0A0G2JG01 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13n-4A0A0G2JG01 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13n-4A0A0G2JG01 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
Trav13n-4A0A0G2JG01 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13n-4A0A0G2JG01 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.06■□□□□ 0.48
Trav13n-4A0A0G2JG01 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13n-4A0A0G2JG01 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav13n-4A0A0G2JG01 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13n-4A0A0G2JG01 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13n-4A0A0G2JG01 Gm4799-201ENSMUST00000095396 657 ntBASIC18.05■□□□□ 0.48
Trav13n-4A0A0G2JG01 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13n-4A0A0G2JG01 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13n-4A0A0G2JG01 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13n-4A0A0G2JG01 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13n-4A0A0G2JG01 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13n-4A0A0G2JG01 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13n-4A0A0G2JG01 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav13n-4A0A0G2JG01 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trav13n-4A0A0G2JG01 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.03■□□□□ 0.48
Trav13n-4A0A0G2JG01 Gm16437-201ENSMUST00000025669 507 ntBASIC18.03■□□□□ 0.48
Trav13n-4A0A0G2JG01 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13n-4A0A0G2JG01 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13n-4A0A0G2JG01 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.02■□□□□ 0.48
Trav13n-4A0A0G2JG01 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13n-4A0A0G2JG01 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13n-4A0A0G2JG01 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13n-4A0A0G2JG01 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13n-4A0A0G2JG01 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13n-4A0A0G2JG01 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.01■□□□□ 0.47
Trav13n-4A0A0G2JG01 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav13n-4A0A0G2JG01 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13n-4A0A0G2JG01 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav13n-4A0A0G2JG01 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13n-4A0A0G2JG01 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13n-4A0A0G2JG01 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18■□□□□ 0.47
Trav13n-4A0A0G2JG01 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18■□□□□ 0.47
Trav13n-4A0A0G2JG01 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Trav13n-4A0A0G2JG01 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13n-4A0A0G2JG01 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav13n-4A0A0G2JG01 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13n-4A0A0G2JG01 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav13n-4A0A0G2JG01 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav13n-4A0A0G2JG01 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav13n-4A0A0G2JG01 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.99■□□□□ 0.47
Trav13n-4A0A0G2JG01 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav13n-4A0A0G2JG01 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav13n-4A0A0G2JG01 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-4A0A0G2JG01 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-4A0A0G2JG01 Mir3960-201ENSMUST00000198213 73 ntBASIC17.98■□□□□ 0.47
Trav13n-4A0A0G2JG01 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-4A0A0G2JG01 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-4A0A0G2JG01 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-4A0A0G2JG01 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13n-4A0A0G2JG01 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13n-4A0A0G2JG01 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13n-4A0A0G2JG01 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav13n-4A0A0G2JG01 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13n-4A0A0G2JG01 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.96■□□□□ 0.47
Trav13n-4A0A0G2JG01 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13n-4A0A0G2JG01 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13n-4A0A0G2JG01 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13n-4A0A0G2JG01 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13n-4A0A0G2JG01 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav13n-4A0A0G2JG01 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trav13n-4A0A0G2JG01 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav13n-4A0A0G2JG01 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13n-4A0A0G2JG01 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav13n-4A0A0G2JG01 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13n-4A0A0G2JG01 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13n-4A0A0G2JG01 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13n-4A0A0G2JG01 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Gm12366-201ENSMUST00000121722 873 ntBASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Gm5786-201ENSMUST00000085368 882 ntBASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13n-4A0A0G2JG01 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav13n-4A0A0G2JG01 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav13n-4A0A0G2JG01 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav13n-4A0A0G2JG01 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav13n-4A0A0G2JG01 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13n-4A0A0G2JG01 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13n-4A0A0G2JG01 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13n-4A0A0G2JG01 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav13n-4A0A0G2JG01 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13n-4A0A0G2JG01 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav13n-4A0A0G2JG01 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav13n-4A0A0G2JG01 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav13n-4A0A0G2JG01 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms