Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-5A0A0G2JFX6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-5A0A0G2JFX6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav7-5A0A0G2JFX6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.57■□□□□ 0.4
Trav7-5A0A0G2JFX6 Gm9806-201ENSMUST00000051080 552 ntBASIC17.57■□□□□ 0.4
Trav7-5A0A0G2JFX6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-5A0A0G2JFX6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-5A0A0G2JFX6 Gm11687-201ENSMUST00000118911 886 ntBASIC17.56■□□□□ 0.4
Trav7-5A0A0G2JFX6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-5A0A0G2JFX6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-5A0A0G2JFX6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-5A0A0G2JFX6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-5A0A0G2JFX6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-5A0A0G2JFX6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-5A0A0G2JFX6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7-5A0A0G2JFX6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Scarna2-201ENSMUST00000157560 414 ntBASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7-5A0A0G2JFX6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-5A0A0G2JFX6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7-5A0A0G2JFX6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trav7-5A0A0G2JFX6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav7-5A0A0G2JFX6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-5A0A0G2JFX6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-5A0A0G2JFX6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav7-5A0A0G2JFX6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-5A0A0G2JFX6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav7-5A0A0G2JFX6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-5A0A0G2JFX6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-5A0A0G2JFX6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7-5A0A0G2JFX6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Trav7-5A0A0G2JFX6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7-5A0A0G2JFX6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav7-5A0A0G2JFX6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav7-5A0A0G2JFX6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav7-5A0A0G2JFX6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav7-5A0A0G2JFX6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Mir6538-201ENSMUST00000183713 110 ntBASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7-5A0A0G2JFX6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-5A0A0G2JFX6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-5A0A0G2JFX6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-5A0A0G2JFX6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-5A0A0G2JFX6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-5A0A0G2JFX6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-5A0A0G2JFX6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-5A0A0G2JFX6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7-5A0A0G2JFX6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav7-5A0A0G2JFX6 Gm16437-201ENSMUST00000025669 507 ntBASIC17.49■□□□□ 0.39
Trav7-5A0A0G2JFX6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-5A0A0G2JFX6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7-5A0A0G2JFX6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-5A0A0G2JFX6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-5A0A0G2JFX6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Trav7-5A0A0G2JFX6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-5A0A0G2JFX6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-5A0A0G2JFX6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7-5A0A0G2JFX6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav7-5A0A0G2JFX6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-5A0A0G2JFX6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-5A0A0G2JFX6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-5A0A0G2JFX6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7-5A0A0G2JFX6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav7-5A0A0G2JFX6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav7-5A0A0G2JFX6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-5A0A0G2JFX6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav7-5A0A0G2JFX6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav7-5A0A0G2JFX6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-5A0A0G2JFX6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav7-5A0A0G2JFX6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-5A0A0G2JFX6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7-5A0A0G2JFX6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7-5A0A0G2JFX6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav7-5A0A0G2JFX6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms