Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav13n-1A0A0G2JEU8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav13n-1A0A0G2JEU8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13n-1A0A0G2JEU8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Gm27502-201ENSMUST00000183495 199 ntBASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Gm12366-201ENSMUST00000121722 873 ntBASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Gm5786-201ENSMUST00000085368 882 ntBASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13n-1A0A0G2JEU8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav13n-1A0A0G2JEU8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Terc-201ENSMUST00000082862 423 ntBASIC16.08■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-1A0A0G2JEU8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-1A0A0G2JEU8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-1A0A0G2JEU8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.04■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13n-1A0A0G2JEU8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Gm7332-201ENSMUST00000118351 454 ntBASIC16.02■□□□□ 0.16
Trav13n-1A0A0G2JEU8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms