Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4-3A0A0B4J1K1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav4-3A0A0B4J1K1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-3A0A0B4J1K1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-3A0A0B4J1K1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-3A0A0B4J1K1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-3A0A0B4J1K1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-3A0A0B4J1K1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4-3A0A0B4J1K1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav4-3A0A0B4J1K1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-3A0A0B4J1K1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-3A0A0B4J1K1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-3A0A0B4J1K1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4-3A0A0B4J1K1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-3A0A0B4J1K1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-3A0A0B4J1K1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav4-3A0A0B4J1K1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-3A0A0B4J1K1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-3A0A0B4J1K1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-3A0A0B4J1K1 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.37■□□□□ 0.05
Trav4-3A0A0B4J1K1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav4-3A0A0B4J1K1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-3A0A0B4J1K1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-3A0A0B4J1K1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-3A0A0B4J1K1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-3A0A0B4J1K1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-3A0A0B4J1K1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-3A0A0B4J1K1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-3A0A0B4J1K1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav4-3A0A0B4J1K1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav4-3A0A0B4J1K1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-3A0A0B4J1K1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-3A0A0B4J1K1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-3A0A0B4J1K1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-3A0A0B4J1K1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-3A0A0B4J1K1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav4-3A0A0B4J1K1 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.34■□□□□ 0.05
Trav4-3A0A0B4J1K1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-3A0A0B4J1K1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav4-3A0A0B4J1K1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-3A0A0B4J1K1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav4-3A0A0B4J1K1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-3A0A0B4J1K1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-3A0A0B4J1K1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-3A0A0B4J1K1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-3A0A0B4J1K1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-3A0A0B4J1K1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-3A0A0B4J1K1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav4-3A0A0B4J1K1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-3A0A0B4J1K1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-3A0A0B4J1K1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav4-3A0A0B4J1K1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-3A0A0B4J1K1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-3A0A0B4J1K1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-3A0A0B4J1K1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-3A0A0B4J1K1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav4-3A0A0B4J1K1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-3A0A0B4J1K1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-3A0A0B4J1K1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-3A0A0B4J1K1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-3A0A0B4J1K1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-3A0A0B4J1K1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms