Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.23■□□□□ 0.51
Ighv1-20A0A0A6YX66 Gm44428-201ENSMUST00000204474 874 ntBASIC18.23■□□□□ 0.51
Ighv1-20A0A0A6YX66 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ighv1-20A0A0A6YX66 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ighv1-20A0A0A6YX66 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-20A0A0A6YX66 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-20A0A0A6YX66 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ighv1-20A0A0A6YX66 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-20A0A0A6YX66 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-20A0A0A6YX66 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-20A0A0A6YX66 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.18■□□□□ 0.5
Ighv1-20A0A0A6YX66 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ighv1-20A0A0A6YX66 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-20A0A0A6YX66 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.17■□□□□ 0.5
Ighv1-20A0A0A6YX66 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.17■□□□□ 0.5
Ighv1-20A0A0A6YX66 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ighv1-20A0A0A6YX66 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ighv1-20A0A0A6YX66 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Ighv1-20A0A0A6YX66 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-20A0A0A6YX66 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-20A0A0A6YX66 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-20A0A0A6YX66 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.16■□□□□ 0.5
Ighv1-20A0A0A6YX66 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-20A0A0A6YX66 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ighv1-20A0A0A6YX66 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.15■□□□□ 0.5
Ighv1-20A0A0A6YX66 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-20A0A0A6YX66 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.15■□□□□ 0.5
Ighv1-20A0A0A6YX66 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-20A0A0A6YX66 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-20A0A0A6YX66 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-20A0A0A6YX66 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.14■□□□□ 0.49
Ighv1-20A0A0A6YX66 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.14■□□□□ 0.49
Ighv1-20A0A0A6YX66 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-20A0A0A6YX66 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-20A0A0A6YX66 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-20A0A0A6YX66 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-20A0A0A6YX66 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-20A0A0A6YX66 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-20A0A0A6YX66 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-20A0A0A6YX66 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-20A0A0A6YX66 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-20A0A0A6YX66 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-20A0A0A6YX66 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-20A0A0A6YX66 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-20A0A0A6YX66 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv1-20A0A0A6YX66 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ighv1-20A0A0A6YX66 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-20A0A0A6YX66 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Ighv1-20A0A0A6YX66 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-20A0A0A6YX66 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-20A0A0A6YX66 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-20A0A0A6YX66 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.09■□□□□ 0.49
Ighv1-20A0A0A6YX66 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
Ighv1-20A0A0A6YX66 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-20A0A0A6YX66 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-20A0A0A6YX66 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-20A0A0A6YX66 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ighv1-20A0A0A6YX66 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-20A0A0A6YX66 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-20A0A0A6YX66 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-20A0A0A6YX66 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-20A0A0A6YX66 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-20A0A0A6YX66 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.08■□□□□ 0.49
Ighv1-20A0A0A6YX66 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-20A0A0A6YX66 Gm10420-201ENSMUST00000121713 882 ntBASIC18.08■□□□□ 0.48
Ighv1-20A0A0A6YX66 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.08■□□□□ 0.48
Ighv1-20A0A0A6YX66 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-20A0A0A6YX66 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-20A0A0A6YX66 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-20A0A0A6YX66 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms