Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14n-3A0A075B645 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14n-3A0A075B645 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav14n-3A0A075B645 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14n-3A0A075B645 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav14n-3A0A075B645 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav14n-3A0A075B645 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav14n-3A0A075B645 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav14n-3A0A075B645 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav14n-3A0A075B645 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav14n-3A0A075B645 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav14n-3A0A075B645 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav14n-3A0A075B645 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav14n-3A0A075B645 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav14n-3A0A075B645 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav14n-3A0A075B645 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav14n-3A0A075B645 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav14n-3A0A075B645 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav14n-3A0A075B645 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trav14n-3A0A075B645 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trav14n-3A0A075B645 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.02■□□□□ 0.31
Trav14n-3A0A075B645 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav14n-3A0A075B645 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav14n-3A0A075B645 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav14n-3A0A075B645 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav14n-3A0A075B645 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav14n-3A0A075B645 Gm16148-201ENSMUST00000119653 893 ntBASIC17.01■□□□□ 0.31
Trav14n-3A0A075B645 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav14n-3A0A075B645 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav14n-3A0A075B645 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav14n-3A0A075B645 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav14n-3A0A075B645 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav14n-3A0A075B645 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav14n-3A0A075B645 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav14n-3A0A075B645 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17■□□□□ 0.31
Trav14n-3A0A075B645 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav14n-3A0A075B645 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav14n-3A0A075B645 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav14n-3A0A075B645 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.99■□□□□ 0.31
Trav14n-3A0A075B645 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav14n-3A0A075B645 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav14n-3A0A075B645 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav14n-3A0A075B645 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-3A0A075B645 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-3A0A075B645 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav14n-3A0A075B645 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav14n-3A0A075B645 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-3A0A075B645 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-3A0A075B645 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav14n-3A0A075B645 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav14n-3A0A075B645 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav14n-3A0A075B645 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav14n-3A0A075B645 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav14n-3A0A075B645 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav14n-3A0A075B645 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.96■□□□□ 0.31
Trav14n-3A0A075B645 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav14n-3A0A075B645 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav14n-3A0A075B645 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav14n-3A0A075B645 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav14n-3A0A075B645 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav14n-3A0A075B645 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav14n-3A0A075B645 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Gm8109-201ENSMUST00000194076 746 ntBASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-3A0A075B645 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav14n-3A0A075B645 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav14n-3A0A075B645 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav14n-3A0A075B645 Gm30023-201ENSMUST00000197970 889 ntBASIC16.93■□□□□ 0.3
Trav14n-3A0A075B645 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav14n-3A0A075B645 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav14n-3A0A075B645 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav14n-3A0A075B645 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-3A0A075B645 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-3A0A075B645 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-3A0A075B645 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav14n-3A0A075B645 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav14n-3A0A075B645 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav14n-3A0A075B645 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-3A0A075B645 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav14n-3A0A075B645 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-3A0A075B645 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav14n-3A0A075B645 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav14n-3A0A075B645 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav14n-3A0A075B645 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav14n-3A0A075B645 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav14n-3A0A075B645 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav14n-3A0A075B645 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav14n-3A0A075B645 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav14n-3A0A075B645 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav14n-3A0A075B645 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav14n-3A0A075B645 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trav14n-3A0A075B645 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms