Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8-1A0A075B641 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8-1A0A075B641 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8-1A0A075B641 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Trav8-1A0A075B641 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav8-1A0A075B641 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8-1A0A075B641 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8-1A0A075B641 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8-1A0A075B641 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8-1A0A075B641 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8-1A0A075B641 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8-1A0A075B641 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8-1A0A075B641 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8-1A0A075B641 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.04■□□□□ 0.16
Trav8-1A0A075B641 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav8-1A0A075B641 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8-1A0A075B641 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8-1A0A075B641 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8-1A0A075B641 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav8-1A0A075B641 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8-1A0A075B641 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8-1A0A075B641 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8-1A0A075B641 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Trav8-1A0A075B641 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8-1A0A075B641 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8-1A0A075B641 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8-1A0A075B641 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8-1A0A075B641 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8-1A0A075B641 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8-1A0A075B641 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8-1A0A075B641 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav8-1A0A075B641 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.02■□□□□ 0.15
Trav8-1A0A075B641 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8-1A0A075B641 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8-1A0A075B641 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8-1A0A075B641 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8-1A0A075B641 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8-1A0A075B641 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8-1A0A075B641 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav8-1A0A075B641 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8-1A0A075B641 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8-1A0A075B641 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16■□□□□ 0.15
Trav8-1A0A075B641 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8-1A0A075B641 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8-1A0A075B641 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav8-1A0A075B641 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16■□□□□ 0.15
Trav8-1A0A075B641 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8-1A0A075B641 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8-1A0A075B641 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8-1A0A075B641 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Trav8-1A0A075B641 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8-1A0A075B641 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav8-1A0A075B641 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8-1A0A075B641 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav8-1A0A075B641 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8-1A0A075B641 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8-1A0A075B641 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8-1A0A075B641 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav8-1A0A075B641 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8-1A0A075B641 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8-1A0A075B641 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8-1A0A075B641 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav8-1A0A075B641 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8-1A0A075B641 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8-1A0A075B641 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8-1A0A075B641 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8-1A0A075B641 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav8-1A0A075B641 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav8-1A0A075B641 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8-1A0A075B641 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav8-1A0A075B641 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8-1A0A075B641 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav8-1A0A075B641 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav8-1A0A075B641 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8-1A0A075B641 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8-1A0A075B641 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8-1A0A075B641 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8-1A0A075B641 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav8-1A0A075B641 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms