Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav15d-1-dv6d-1A0A075B624 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.05■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav15d-1-dv6d-1A0A075B624 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.01■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Gm37136-201ENSMUST00000194368 194 ntBASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Nkain2-201ENSMUST00000092602 558 ntBASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.99■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.98■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.98■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav15d-1-dv6d-1A0A075B624 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trav15d-1-dv6d-1A0A075B624 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms