Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4n-4A0A075B615 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4n-4A0A075B615 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4n-4A0A075B615 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4n-4A0A075B615 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4n-4A0A075B615 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav4n-4A0A075B615 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4n-4A0A075B615 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4n-4A0A075B615 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4n-4A0A075B615 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4n-4A0A075B615 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4n-4A0A075B615 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4n-4A0A075B615 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav4n-4A0A075B615 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4n-4A0A075B615 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav4n-4A0A075B615 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav4n-4A0A075B615 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav4n-4A0A075B615 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav4n-4A0A075B615 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav4n-4A0A075B615 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav4n-4A0A075B615 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4n-4A0A075B615 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav4n-4A0A075B615 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4n-4A0A075B615 Particl-201ENSMUST00000205370 1560 ntBASIC15.7■□□□□ 0.1
Trav4n-4A0A075B615 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav4n-4A0A075B615 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4n-4A0A075B615 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4n-4A0A075B615 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4n-4A0A075B615 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4n-4A0A075B615 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4n-4A0A075B615 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav4n-4A0A075B615 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4n-4A0A075B615 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4n-4A0A075B615 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav4n-4A0A075B615 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4n-4A0A075B615 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4n-4A0A075B615 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav4n-4A0A075B615 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4n-4A0A075B615 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4n-4A0A075B615 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4n-4A0A075B615 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav4n-4A0A075B615 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Trav4n-4A0A075B615 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4n-4A0A075B615 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4n-4A0A075B615 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav4n-4A0A075B615 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4n-4A0A075B615 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav4n-4A0A075B615 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4n-4A0A075B615 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trav4n-4A0A075B615 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.65■□□□□ 0.1
Trav4n-4A0A075B615 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trav4n-4A0A075B615 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4n-4A0A075B615 Notumos-201ENSMUST00000151998 2659 ntBASIC15.64■□□□□ 0.09
Trav4n-4A0A075B615 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4n-4A0A075B615 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav4n-4A0A075B615 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Trav4n-4A0A075B615 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Trav4n-4A0A075B615 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4n-4A0A075B615 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav4n-4A0A075B615 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4n-4A0A075B615 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4n-4A0A075B615 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4n-4A0A075B615 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4n-4A0A075B615 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav4n-4A0A075B615 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4n-4A0A075B615 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4n-4A0A075B615 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4n-4A0A075B615 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4n-4A0A075B615 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4n-4A0A075B615 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4n-4A0A075B615 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4n-4A0A075B615 Peli2-204ENSMUST00000226513 1320 ntBASIC15.62■□□□□ 0.09
Trav4n-4A0A075B615 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4n-4A0A075B615 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4n-4A0A075B615 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav4n-4A0A075B615 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4n-4A0A075B615 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4n-4A0A075B615 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav4n-4A0A075B615 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav4n-4A0A075B615 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4n-4A0A075B615 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4n-4A0A075B615 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav4n-4A0A075B615 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4n-4A0A075B615 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4n-4A0A075B615 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4n-4A0A075B615 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4n-4A0A075B615 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4n-4A0A075B615 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4n-4A0A075B615 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4n-4A0A075B615 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4n-4A0A075B615 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms