Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Mir8098-201ENSMUST00000184011 137 ntBASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.25□□□□□ -0.13
Cldn6Q9Z262 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn6Q9Z262 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Gm13884-201ENSMUST00000118103 829 ntBASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Gm6550-201ENSMUST00000187574 993 ntBASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Gm28659-201ENSMUST00000188013 759 ntBASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Gm9682-201ENSMUST00000197505 556 ntBASIC14.23□□□□□ -0.13
Cldn6Q9Z262 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn6Q9Z262 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn6Q9Z262 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn6Q9Z262 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.22□□□□□ -0.13
Cldn6Q9Z262 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn6Q9Z262 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cldn6Q9Z262 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms