Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm14776-201ENSMUST00000121029 887 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm11745-201ENSMUST00000121669 448 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm11424-201ENSMUST00000121929 829 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm29747-201ENSMUST00000194764 585 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm42919-201ENSMUST00000197753 1284 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm43125-201ENSMUST00000201724 730 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.38□□□□□ -0.27
Nubp1Q9R060 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nubp1Q9R060 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.38□□□□□ -0.27
Nubp1Q9R060 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nubp1Q9R060 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm22065-201ENSMUST00000103753 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm22066-201ENSMUST00000103761 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm24932-201ENSMUST00000103763 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm24115-201ENSMUST00000103799 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm22190-201ENSMUST00000103827 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm22191-201ENSMUST00000103831 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm24721-201ENSMUST00000103849 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm28018-201ENSMUST00000103869 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm26399-201ENSMUST00000103937 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm15171-201ENSMUST00000122191 334 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm25349-201ENSMUST00000177728 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm23616-201ENSMUST00000177797 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm25871-201ENSMUST00000177816 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm5866-201ENSMUST00000177881 973 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm24752-201ENSMUST00000178240 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm24496-201ENSMUST00000178287 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm25649-201ENSMUST00000178476 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm25548-201ENSMUST00000178681 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm23147-201ENSMUST00000178841 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm26095-201ENSMUST00000179270 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm22171-201ENSMUST00000179283 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm23936-201ENSMUST00000179354 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm22619-201ENSMUST00000179516 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm25255-201ENSMUST00000179579 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm24755-201ENSMUST00000179691 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm26506-201ENSMUST00000179692 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm25086-201ENSMUST00000179931 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm23243-201ENSMUST00000180047 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm24659-201ENSMUST00000180212 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm24169-201ENSMUST00000180244 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm23689-201ENSMUST00000180354 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm27622-201ENSMUST00000183779 60 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm27359-201ENSMUST00000184153 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm27785-201ENSMUST00000184268 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm27466-201ENSMUST00000184396 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm27703-201ENSMUST00000184836 110 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 AC125539.1-202ENSMUST00000226449 670 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.37□□□□□ -0.27
Nubp1Q9R060 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Nubp1Q9R060 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nubp1Q9R060 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms