Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim44Q9QXA7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim44Q9QXA7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim44Q9QXA7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Gm10698-201ENSMUST00000182663 604 ntBASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim44Q9QXA7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim44Q9QXA7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim44Q9QXA7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim44Q9QXA7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim44Q9QXA7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim44Q9QXA7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim44Q9QXA7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms