Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Crlf1Q9JM58 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Gm15483-201ENSMUST00000120338 456 ntBASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Gm29667-201ENSMUST00000190817 490 ntBASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Gm6266-201ENSMUST00000203844 806 ntBASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Crlf1Q9JM58 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Crlf1Q9JM58 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Crlf1Q9JM58 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf1Q9JM58 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf1Q9JM58 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms