Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube4bQ9ES00 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Gm36967-201ENSMUST00000193814 266 ntBASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube4bQ9ES00 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ube4bQ9ES00 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Gm2274-201ENSMUST00000184539 609 ntBASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ube4bQ9ES00 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.62□□□□□ -0.07
Ube4bQ9ES00 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms