Protein–RNA interactions for Protein: Q9D9M4

Pdzd9, PDZ domain-containing protein 9, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd9Q9D9M4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 Gm2423-201ENSMUST00000074863 733 ntBASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.2■□□□□ 0.66
Pdzd9Q9D9M4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Gm5866-201ENSMUST00000177881 973 ntBASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdzd9Q9D9M4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.18■□□□□ 0.66
Pdzd9Q9D9M4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Mir7684-201ENSMUST00000183858 60 ntBASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Gm9063-201ENSMUST00000223299 582 ntBASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdzd9Q9D9M4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Gm27533-201ENSMUST00000183800 152 ntBASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdzd9Q9D9M4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Pdzd9Q9D9M4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdzd9Q9D9M4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdzd9Q9D9M4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.15■□□□□ 0.66
Pdzd9Q9D9M4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdzd9Q9D9M4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdzd9Q9D9M4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms