Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Gm18489-201ENSMUST00000172565 551 ntBASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gtf3c6Q9D8P7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Grk6-207ENSMUST00000225925 2769 ntBASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gtf3c6Q9D8P7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Gm24589-201ENSMUST00000116692 94 ntBASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gtf3c6Q9D8P7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Gtf3c6Q9D8P7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Gm17971-201ENSMUST00000190239 806 ntBASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gtf3c6Q9D8P7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms