Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm8825-201ENSMUST00000182565 998 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm4518-201ENSMUST00000182638 718 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm44454-201ENSMUST00000198541 138 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Grk6-207ENSMUST00000225925 2769 ntBASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ssr1Q9CY50 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Gm7284-201ENSMUST00000131667 944 ntBASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Gm27704-201ENSMUST00000185094 107 ntBASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ssr1Q9CY50 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ssr1Q9CY50 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ssr1Q9CY50 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms