Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retreg3Q9CQV4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retreg3Q9CQV4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retreg3Q9CQV4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Retreg3Q9CQV4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retreg3Q9CQV4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 CT010431.1-201ENSMUST00000221249 1080 ntBASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retreg3Q9CQV4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms