Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Gm19164-201ENSMUST00000210667 640 ntBASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd1Q99MH6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Gm15165-201ENSMUST00000118140 502 ntBASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Gm25745-201ENSMUST00000174945 133 ntBASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd1Q99MH6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd1Q99MH6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms