Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Gm4459-201ENSMUST00000118750 468 ntBASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Gm7977-201ENSMUST00000193787 748 ntBASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb4Q91XZ6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Gm12497-201ENSMUST00000138778 237 ntBASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Gm17807-201ENSMUST00000186869 298 ntBASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Gm18622-201ENSMUST00000219361 595 ntBASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb4Q91XZ6 Grk6-207ENSMUST00000225925 2769 ntBASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Gm19164-201ENSMUST00000210667 640 ntBASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb4Q91XZ6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb4Q91XZ6 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms