Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab40bQ8VHP8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Gm9013-201ENSMUST00000132939 882 ntBASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Gm9172-201ENSMUST00000212092 954 ntBASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40bQ8VHP8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Gm13312-201ENSMUST00000119631 718 ntBASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40bQ8VHP8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms