Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox30Q8CGW4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Gm27646-201ENSMUST00000183989 110 ntBASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox30Q8CGW4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox30Q8CGW4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Gm10499-201ENSMUST00000174094 934 ntBASIC16.61■□□□□ 0.25
Sox30Q8CGW4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox30Q8CGW4 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox30Q8CGW4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms