Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Gm15824-201ENSMUST00000119516 955 ntBASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Celf4-206ENSMUST00000224553 1729 ntBASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rp1l1Q8CGM2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Gm27701-201ENSMUST00000184498 110 ntBASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Mir1894-201ENSMUST00000122802 81 ntBASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Mir125a-201ENSMUST00000083545 68 ntBASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rp1l1Q8CGM2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rp1l1Q8CGM2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rp1l1Q8CGM2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms