Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc60Q8C4J0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc60Q8C4J0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.39■□□□□ 0.7
Ccdc60Q8C4J0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc60Q8C4J0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc60Q8C4J0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc60Q8C4J0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc60Q8C4J0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc60Q8C4J0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc60Q8C4J0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Gm27525-201ENSMUST00000184465 107 ntBASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc60Q8C4J0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc60Q8C4J0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc60Q8C4J0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc60Q8C4J0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc60Q8C4J0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc60Q8C4J0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc60Q8C4J0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc60Q8C4J0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms