Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim4Q8C1Q6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Gm4459-201ENSMUST00000118750 468 ntBASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Gm15372-201ENSMUST00000120729 834 ntBASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Gm27867-201ENSMUST00000184778 125 ntBASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim4Q8C1Q6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Gm7284-201ENSMUST00000131667 944 ntBASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Gm8655-201ENSMUST00000221159 852 ntBASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smim4Q8C1Q6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms